RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PPP2R2DQ66LE6 453 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 RAB11FIP4Q86YS3 637 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 HERC6Q8IVU3 1022 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 CCDC82Q8N4S0 544 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 WNT8BQ93098 351 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 GPR20Q99678 358 aa17.6■□□□□ 0.41
VTI1A-203ENST00000472892 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
VTI1A-203ENST00000472892 TANC1Q9C0D5 1861 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
VTI1A-203ENST00000472892 ZNF618Q5T7W0 954 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 CNKSR3Q6P9H4 555 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
VTI1A-203ENST00000472892 NLRX1Q86UT6 975 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 CUL9Q8IWT3 2517 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 VCANP13611 3396 aa17.59■□□□□ 0.41
VTI1A-203ENST00000472892 GBF1Q92538 1859 aa17.58■□□□□ 0.41
VTI1A-203ENST00000472892 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 C17orf102A2RUQ5 167 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 KIF28PB7ZC32 967 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 CDC45O75419 566 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 CA3P07451 260 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 SMIM10L2AP0DMW4 78 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 SMIM10L2BP0DMW5 78 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 WDR5P61964 334 aaKnown RBP17.58■□□□□ 0.4
VTI1A-203ENST00000472892 APOA5Q6Q788 366 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 MICU3Q86XE3 530 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 GIMAP8Q8ND71 665 aaPredicted RBP17.58■□□□□ 0.4
VTI1A-203ENST00000472892 TET1Q8NFU7 2136 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 RNPEPQ9H4A4 650 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 CHD7Q9P2D1 2997 aa17.58■□□□□ 0.4
VTI1A-203ENST00000472892 ABHD14A-ACY1A0A1B0GW23 586 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 ITGB5P18084 799 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 IGFBP4P22692 258 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 MBTPS1Q14703 1052 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 TCTN1Q2MV58 587 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 ADCK5Q3MIX3 580 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 ATP6V0A1Q93050 837 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 RBM28Q9NW13 759 aaKnown RBP17.57■□□□□ 0.4
VTI1A-203ENST00000472892 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 TELO2Q9Y4R8 837 aa17.57■□□□□ 0.4
VTI1A-203ENST00000472892 ATP9AO75110 1047 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 THPOP40225 353 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 KCNJ6P48051 423 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 TAP1Q03518 808 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 FUT2Q10981 343 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 KRT32Q14532 448 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 UBE2SQ16763 222 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 PPM1EQ8WY54 764 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 PCDHA6Q9UN73 950 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 PCDHA8Q9Y5H6 950 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 UBIAD1Q9Y5Z9 338 aa17.56■□□□□ 0.4
VTI1A-203ENST00000472892 EMSYQ7Z589 1322 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 RSPH10B2B2RC85 870 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 MAFGO15525 162 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 TREHO43280 583 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 ZBTB43O43298 467 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 EFCAB14O75071 495 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 LGR5O75473 907 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 HMGB1P09429 215 aaKnown RBP17.55■□□□□ 0.4
VTI1A-203ENST00000472892 RSPH10BP0C881 870 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 KCNA2P16389 499 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 POU3F3P20264 500 aaPredicted RBP17.55■□□□□ 0.4
VTI1A-203ENST00000472892 IKBKEQ14164 716 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 KCNB2Q92953 911 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 PRDM6Q9NQX0 595 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 MYO9BQ13459 2157 aa17.55■□□□□ 0.4
VTI1A-203ENST00000472892 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 SPDYE3A6NKU9 549 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 TLL1O43897 1013 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 ARHGEF15O94989 841 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 GNAT1P11488 350 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 ADAM17P78536 824 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 DEFB103AP81534 67 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
VTI1A-203ENST00000472892 RTN1Q16799 776 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 UTP14CQ5TAP6 766 aaKnown RBP17.54■□□□□ 0.4
VTI1A-203ENST00000472892 WWC2Q6AWC2 1192 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 TRIM50Q86XT4 487 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 SYMPKQ92797 1274 aaKnown RBP17.54■□□□□ 0.4
VTI1A-203ENST00000472892 JADE2Q9NQC1 790 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
VTI1A-203ENST00000472892 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
VTI1A-203ENST00000472892 ZNF215Q9UL58 517 aaPredicted RBP17.54■□□□□ 0.4
VTI1A-203ENST00000472892 V9GY48 417 aaPredicted RBP17.54■□□□□ 0.4
VTI1A-203ENST00000472892 SPTBN5Q9NRC6 3674 aaKnown RBP17.53■□□□□ 0.4
VTI1A-203ENST00000472892 RFXAPO00287 272 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 CAND2O75155 1236 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 RCAN1P53805 252 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 SP4Q02446 784 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 MKRN4PQ13434 485 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-203ENST00000472892 MTMR1Q13613 665 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms