RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 BTG4Q9NY30 223 aa8.56□□□□□ -1.04
SMC5-202ENST00000471372 DDX20Q9UHI6 824 aaKnown RBP8.56□□□□□ -1.04
SMC5-202ENST00000471372 TCRBV5S4A2TA0A5A2 114 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 TRIM75PA6NK02 468 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 GOLGA8AA7E2F4 631 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 GOLGA8BA8MQT2 603 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 DHX15O43143 795 aaKnown RBP8.55□□□□□ -1.04
SMC5-202ENST00000471372 IL33O95760 270 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 COL8A1P27658 744 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 NEK3P51956 506 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 SMAD3P84022 425 aaKnown RBP8.55□□□□□ -1.04
SMC5-202ENST00000471372 GTF2H3Q13889 308 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 SMAD2Q15796 467 aaKnown RBP8.55□□□□□ -1.04
SMC5-202ENST00000471372 VPS72Q15906 364 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 CYP27C1Q4G0S4 372 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 ARHGAP29Q52LW3 1261 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 TMED8Q6PL24 325 aaPredicted RBP8.55□□□□□ -1.04
SMC5-202ENST00000471372 CLEC10AQ8IUN9 316 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 NAT16Q8N8M0 369 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 LMBR1Q8WVP7 490 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 EVI5LQ96CN4 794 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 FAM83CQ9BQN1 747 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 TOMM22Q9NS69 142 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 ZNF652Q9Y2D9 606 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 MRFAP1Q9Y605 127 aa8.55□□□□□ -1.04
SMC5-202ENST00000471372 TMEM82A0PJX8 343 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 HMX2A2RU54 273 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 WTIPA6NIX2 430 aaPredicted RBP8.54□□□□□ -1.04
SMC5-202ENST00000471372 H3BS24 57 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 ZRANB2O95218 330 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC5-202ENST00000471372 COL6A2P12110 1019 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 LSP1P33241 339 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 PHC1P78364 1004 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 GBX1Q14549 363 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 PDCD1Q15116 288 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 ZNF174Q15697 407 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 CLUL1Q15846 466 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 GAB4Q2WGN9 574 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 C10orf62Q5T681 223 aaPredicted RBP8.54□□□□□ -1.04
SMC5-202ENST00000471372 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
SMC5-202ENST00000471372 ARHGAP36Q6ZRI8 547 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 PTRH1Q86Y79 214 aaKnown RBP8.54□□□□□ -1.04
SMC5-202ENST00000471372 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 PJA1Q8NG27 643 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 AIFM3Q96NN9 605 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 RCAN3Q9UKA8 241 aa8.54□□□□□ -1.04
SMC5-202ENST00000471372 NOC2LQ9Y3T9 749 aaKnown RBP8.54□□□□□ -1.04
SMC5-202ENST00000471372 KLHL33A6NCF5 533 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 TBC1D8O95759 1140 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 NBPF7P0C2Y1 421 aaPredicted RBP8.53□□□□□ -1.04
SMC5-202ENST00000471372 GNAT1P11488 350 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 FPR2P25090 351 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 GTF2A2P52657 109 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 OXCT1P55809 520 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 GALEQ14376 348 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 GPR19Q15760 415 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 EFCAB2Q5VUJ9 269 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 HHIPL2Q6UWX4 724 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 RNF111Q6ZNA4 994 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 CEP68Q76N32 757 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 ALYREFQ86V81 257 aaKnown RBP8.53□□□□□ -1.04
SMC5-202ENST00000471372 ZNF610Q8N9Z0 462 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 TMEM52Q8NDY8 209 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 TGFBRAP1Q8WUH2 860 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 TMEM169Q96HH4 297 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 TEKT5Q96M29 485 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 HSPA12BQ96MM6 686 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 CCM2LQ9NUG4 571 aaPredicted RBP8.53□□□□□ -1.04
SMC5-202ENST00000471372 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
SMC5-202ENST00000471372 PCDHA11Q9Y5I1 949 aa8.53□□□□□ -1.04
SMC5-202ENST00000471372 APAF1O14727 1248 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMC5-202ENST00000471372 IFIT2P09913 472 aaKnown RBP8.52□□□□□ -1.05
SMC5-202ENST00000471372 PTX3P26022 381 aaPredicted RBP8.52□□□□□ -1.05
SMC5-202ENST00000471372 KIF11P52732 1056 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 DHX8Q14562 1220 aaKnown RBP8.52□□□□□ -1.05
SMC5-202ENST00000471372 ACAP2Q15057 778 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 CYP2R1Q6VVX0 501 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 TXNRD3Q86VQ6 643 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 NOSTRINQ8IVI9 506 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 SPACA3Q8IXA5 215 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 AMOTL1Q8IY63 956 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 FBXL6Q8N531 539 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 SH3RF2Q8TEC5 729 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 FBXO41Q8TF61 875 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 UBE2FQ969M7 185 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
SMC5-202ENST00000471372 ZDHHC5Q9C0B5 715 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 SLC12A5Q9H2X9 1139 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 ZMAT4Q9H898 229 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 ERVK13-1Q9NX77 482 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 DUSP13Q9UII6 198 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 INVSQ9Y283 1065 aa8.52□□□□□ -1.05
SMC5-202ENST00000471372 FRMPD2Q68DX3 1309 aaPredicted RBP8.52□□□□□ -1.05
SMC5-202ENST00000471372 H7BY64 318 aa8.51□□□□□ -1.05
SMC5-202ENST00000471372 IFRD1O00458 451 aaPredicted RBP8.51□□□□□ -1.05
SMC5-202ENST00000471372 MAN2B1O00754 1011 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms