RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GPRASP2Q96D09 838 aa10.51□□□□□ -0.73
VPS52-216ENST00000471309 TEKT3Q9BXF9 490 aa10.51□□□□□ -0.73
VPS52-216ENST00000471309 AGO4Q9HCK5 861 aaKnown RBP10.51□□□□□ -0.73
VPS52-216ENST00000471309 KCNH7Q9NS40 1196 aa10.51□□□□□ -0.73
VPS52-216ENST00000471309 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 AP5Z1O43299 807 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 SLC25A27O95847 323 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 SPATA31C1P0DKV0 1188 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 MCM6Q14566 821 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 KCNK18Q7Z418 384 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 VSIG10LQ86VR7 867 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 CATSPER3Q86XQ3 398 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 DNERQ8NFT8 737 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 ENOX1Q8TC92 643 aaKnown RBP10.5□□□□□ -0.73
VPS52-216ENST00000471309 INPP4AQ96PE3 977 aaPredicted RBP10.5□□□□□ -0.73
VPS52-216ENST00000471309 PAGR1Q9BTK6 254 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 MOV10L1Q9BXT6 1211 aaKnown RBP10.5□□□□□ -0.73
VPS52-216ENST00000471309 TUFT1Q9NNX1 390 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 TBC1D22BQ9NU19 505 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 KIAA1024Q9UPX6 916 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 SYNRGQ9UMZ2 1314 aa10.5□□□□□ -0.73
VPS52-216ENST00000471309 CCL15-CCL14A0A0B4J2E2 113 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 PVALEFA0A1B0GWK0 134 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 MYMKA6NI61 221 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 PPP1R3GB7ZBB8 358 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 E9PMD0 336 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 EML1O00423 815 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 MAFGO15525 162 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 NR3C2P08235 984 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 MYCLP12524 364 aaPredicted RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 PPP1R2P41236 205 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ZNF75DP51815 510 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ASIC1P78348 528 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ITGB3BPQ13352 177 aaPredicted RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 EPHA7Q15375 998 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 CCL15Q16663 113 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 KMT5BQ4FZB7 885 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 COBLL1Q53SF7 1204 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 UNC13DQ70J99 1090 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 ANKRD23Q86SG2 305 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 NLRX1Q86UT6 975 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 NCAPG2Q86XI2 1143 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 GIMAP8Q8ND71 665 aaPredicted RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 SHCBP1Q8NEM2 672 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 CDHR1Q96JP9 859 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 MS4A4AQ96JQ5 239 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 UIMC1Q96RL1 719 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 HSD17B14Q9BPX1 270 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
VPS52-216ENST00000471309 HSD3B7Q9H2F3 369 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 UNC45AQ9H3U1 944 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 MROH8Q9H579 483 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 EXOC1Q9NV70 894 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
VPS52-216ENST00000471309 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
VPS52-216ENST00000471309 DHX15O43143 795 aaKnown RBP10.48□□□□□ -0.73
VPS52-216ENST00000471309 CHMP2AO43633 222 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 PLA2G4BP0C869 781 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 ERCC3P19447 782 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 CDC25BP30305 580 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 CYP4A11Q02928 519 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 EHHADHQ08426 723 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 PDE4DQ08499 809 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 STIM1Q13586 685 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 SMYD4Q8IYR2 804 aaPredicted RBP10.48□□□□□ -0.73
VPS52-216ENST00000471309 ADSSL1Q8N142 457 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 MRFAP1L1Q96HT8 127 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 MED15Q96RN5 788 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 TRIM5Q9C035 493 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 TXNRD2Q9NNW7 524 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
VPS52-216ENST00000471309 ADD3Q9UEY8 706 aaKnown RBP10.48□□□□□ -0.73
VPS52-216ENST00000471309 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 DNM3Q9UQ16 869 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 GDAQ9Y2T3 454 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 ASTN1O14525 1302 aa10.48□□□□□ -0.73
VPS52-216ENST00000471309 PLXNB2O15031 1838 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 ZNF236Q9UL36 1845 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 POTEB2H3BUK9 544 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 PDHXO00330 501 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 PEX10O60683 326 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 RGS20O76081 388 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 SLITRK3O94933 977 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 EYA4O95677 639 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 CYP11B2P19099 503 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 EDNRBP24530 442 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 SFNP31947 248 aa10.47□□□□□ -0.73
VPS52-216ENST00000471309 GCLCP48506 637 aaPredicted RBP10.47□□□□□ -0.73
VPS52-216ENST00000471309 ALDH5A1P51649 535 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms