RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 LGALS2P05162 132 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 CKBP12277 381 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 FUT2Q10981 343 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 LRRC8DQ7L1W4 858 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 CYFIP1Q7L576 1253 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 HEATR3Q7Z4Q2 680 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 RAB11FIP4Q86YS3 637 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-211ENST00000471260 MAFAQ8NHW3 353 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-211ENST00000471260 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
HMGN1-211ENST00000471260 GPR20Q99678 358 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 FTOQ9C0B1 505 aaKnown RBP eCLIP15.48■□□□□ 0.07
HMGN1-211ENST00000471260 SLC28A3Q9HAS3 691 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
HMGN1-211ENST00000471260 KLF18A0A0U1RQI7 1052 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 FOSP01100 380 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-211ENST00000471260 CXCL10P02778 98 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 GNAT1P11488 350 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 HOXC8P31273 242 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 FGD1P98174 961 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 TCEANC2Q96MN5 208 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 GAS2L1Q99501 681 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-211ENST00000471260 TANC1Q9C0D5 1861 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 RIC8AQ9NPQ8 531 aa15.47■□□□□ 0.07
HMGN1-211ENST00000471260 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-211ENST00000471260 hCG_1642624A0A1W2PR95 340 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 C17orf102A2RUQ5 167 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 KIF28PB7ZC32 967 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 SORBS3O60504 671 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 EFCAB14O75071 495 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 CAND2O75155 1236 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 PSMA5P28066 241 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 NAPAP54920 295 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 TRIM71Q2Q1W2 868 aaKnown RBP15.46■□□□□ 0.07
HMGN1-211ENST00000471260 C8orf34Q49A92 452 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 WWC2Q6AWC2 1192 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 BLOC1S2Q6QNY1 142 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 SERINC5Q86VE9 423 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 BCAS3Q9H6U6 928 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 FAM217BQ9NTX9 383 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-211ENST00000471260 UBIAD1Q9Y5Z9 338 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 V9GY48 417 aaPredicted RBP15.46■□□□□ 0.07
HMGN1-211ENST00000471260 SCN5AQ14524 2016 aa15.46■□□□□ 0.07
HMGN1-211ENST00000471260 EMSYQ7Z589 1322 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 SMIM10L2AP0DMW4 78 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 SMIM10L2BP0DMW5 78 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 KCNA2P16389 499 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 ITGB5P18084 799 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 METAP2P50579 478 aaKnown RBP eCLIP15.45■□□□□ 0.06
HMGN1-211ENST00000471260 MTMR1Q13613 665 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 GPNMBQ14956 572 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 UBE2SQ16763 222 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.45■□□□□ 0.06
HMGN1-211ENST00000471260 ATP6V0A1Q93050 837 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 JAKMIP1Q96N16 626 aaKnown RBP15.45■□□□□ 0.06
HMGN1-211ENST00000471260 AGXT2Q9BYV1 514 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 NKX2-4Q9H2Z4 354 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 RNPEPQ9H4A4 650 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 JADE2Q9NQC1 790 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 BARHL2Q9NY43 387 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 YBX2Q9Y2T7 364 aaKnown RBP15.45■□□□□ 0.06
HMGN1-211ENST00000471260 SNX14Q9Y5W7 946 aa15.45■□□□□ 0.06
HMGN1-211ENST00000471260 MYO9BQ13459 2157 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 ABHD14A-ACY1A0A1B0GW23 586 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 SMCO2A6NFE2 343 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 CDC27P30260 824 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 KCNJ6P48051 423 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 ADCY7P51828 1080 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 RABGGTBP53611 331 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 ZNF200P98182 395 aaPredicted RBP15.44■□□□□ 0.06
HMGN1-211ENST00000471260 AP3B2Q13367 1082 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 MCTP2Q6DN12 878 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 Q6ZUG5 572 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 SEPT1Q8WYJ6 367 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 NID2Q14112 1375 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 TET1Q8NFU7 2136 aa15.44■□□□□ 0.06
HMGN1-211ENST00000471260 NRCAMQ92823 1304 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 STXBP3O00186 592 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 DLL1O00548 723 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 NBNO60934 754 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 ATP9AO75110 1047 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 RPS6KB1P23443 525 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 TCF7P36402 384 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-211ENST00000471260 CLK2P49760 499 aaKnown RBP15.43■□□□□ 0.06
HMGN1-211ENST00000471260 IKBKEQ14164 716 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 HIC1Q14526 733 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 PFKFB3Q16875 520 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-211ENST00000471260 PPP2R2DQ66LE6 453 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 TYW1BQ6NUM6 668 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 TRAF7Q6Q0C0 670 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 HERC6Q8IVU3 1022 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 BRF1Q92994 677 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 MXRA8Q9BRK3 442 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 PRDM12Q9H4Q4 367 aa15.43■□□□□ 0.06
HMGN1-211ENST00000471260 RSPH10B2B2RC85 870 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms