RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ZBTB44Q8NCP5 570 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 PANK1Q8TE04 598 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 ATRIPQ8WXE1 791 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 WNT8BQ93098 351 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 NEK1Q96PY6 1258 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 SLF1Q9BQI6 1058 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 SCNM1Q9BWG6 230 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 OSBPL7Q9BZF2 842 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 TBC1D17Q9HA65 648 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 A1CFQ9NQ94 594 aaKnown RBP7.02□□□□□ -1.29
VARS-222ENST00000470953 POLR3EQ9NVU0 708 aa7.02□□□□□ -1.29
VARS-222ENST00000470953 COL12A1Q99715 3063 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 NAV1Q8NEY1 1877 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 PYCARD-AS1I3L0S3 204 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 ATP2A1O14983 1001 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 NARSO43776 548 aaKnown RBP7.01□□□□□ -1.29
VARS-222ENST00000470953 LRRN2O75325 713 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 SURF6O75683 361 aaKnown RBP7.01□□□□□ -1.29
VARS-222ENST00000470953 CKBP12277 381 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 RFX1P22670 979 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 MTX1Q13505 466 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 DUSP28Q4G0W2 176 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 PROSER1Q86XN7 944 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 ZDHHC14Q8IZN3 488 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 FIBCD1Q8N539 461 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 ZNF513Q8N8E2 541 aaPredicted RBP7.01□□□□□ -1.29
VARS-222ENST00000470953 CAGE1Q8TC20 777 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 COPS5Q92905 334 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 TOP1MTQ969P6 601 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 BORCS6Q96GS4 357 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 RIOK1Q9BRS2 568 aaKnown RBP7.01□□□□□ -1.29
VARS-222ENST00000470953 CLMPQ9H6B4 373 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 GPR108Q9NPR9 543 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 MCM9Q9NXL9 1143 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 DDX19BQ9UMR2 479 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 DUSP12Q9UNI6 340 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 PLAGL2Q9UPG8 496 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 PATJQ8NI35 1801 aa7.01□□□□□ -1.29
VARS-222ENST00000470953 C2CD3Q4AC94 2353 aa7□□□□□ -1.29
VARS-222ENST00000470953 CYP2D7A0A087X1C5 515 aa7□□□□□ -1.29
VARS-222ENST00000470953 PNMA6EA0A0J9YXQ4 647 aa7□□□□□ -1.29
VARS-222ENST00000470953 GIPC1O14908 333 aa7□□□□□ -1.29
VARS-222ENST00000470953 HMMRO75330 724 aa7□□□□□ -1.29
VARS-222ENST00000470953 IDH1O75874 414 aaKnown RBP7□□□□□ -1.29
VARS-222ENST00000470953 CFHP08603 1231 aa7□□□□□ -1.29
VARS-222ENST00000470953 UQCRFS1P1P0C7P4 283 aa7□□□□□ -1.29
VARS-222ENST00000470953 RLBP1P12271 317 aa7□□□□□ -1.29
VARS-222ENST00000470953 TECP42680 631 aa7□□□□□ -1.29
VARS-222ENST00000470953 CSTF1Q05048 431 aaKnown RBP7□□□□□ -1.29
VARS-222ENST00000470953 CSRP2Q16527 193 aa7□□□□□ -1.29
VARS-222ENST00000470953 TRIM71Q2Q1W2 868 aaKnown RBP7□□□□□ -1.29
VARS-222ENST00000470953 TTC39AQ5SRH9 613 aa7□□□□□ -1.29
VARS-222ENST00000470953 ZNF618Q5T7W0 954 aa7□□□□□ -1.29
VARS-222ENST00000470953 ANKRD54Q6NXT1 300 aa7□□□□□ -1.29
VARS-222ENST00000470953 TDRD5Q8NAT2 981 aaKnown RBP7□□□□□ -1.29
VARS-222ENST00000470953 DBF4BQ8NFT6 615 aa7□□□□□ -1.29
VARS-222ENST00000470953 OR6J1Q8NGC5 347 aa7□□□□□ -1.29
VARS-222ENST00000470953 SDR42E1Q8WUS8 393 aa7□□□□□ -1.29
VARS-222ENST00000470953 KIFC2Q96AC6 838 aa7□□□□□ -1.29
VARS-222ENST00000470953 LRIG1Q96JA1 1093 aa7□□□□□ -1.29
VARS-222ENST00000470953 DBNDD2Q9BQY9 259 aa7□□□□□ -1.29
VARS-222ENST00000470953 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
VARS-222ENST00000470953 ANTXR1Q9H6X2 564 aa7□□□□□ -1.29
VARS-222ENST00000470953 TLE6Q9H808 572 aa7□□□□□ -1.29
VARS-222ENST00000470953 SLC38A10Q9HBR0 1119 aa7□□□□□ -1.29
VARS-222ENST00000470953 CA14Q9ULX7 337 aa7□□□□□ -1.29
VARS-222ENST00000470953 SIT1Q9Y3P8 196 aa7□□□□□ -1.29
VARS-222ENST00000470953 FBN2P35556 2912 aa7□□□□□ -1.29
VARS-222ENST00000470953 LCTP09848 1927 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 FBN3Q75N90 2809 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 ASB14A6NK59 587 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 LRP3O75074 770 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 ITGB1P05556 798 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 CPT1AP50416 773 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 LIMK1P53667 647 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 PTPN11Q06124 597 aaPredicted RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 RBL2Q08999 1139 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 ZNF252P-AS1Q0IIN9 211 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 TDGQ13569 410 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 HSP90AB4PQ58FF6 505 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 CCDC158Q5M9N0 1113 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 ERC1Q8IUD2 1116 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 CCDC155Q8N6L0 562 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 PRPF38AQ8NAV1 312 aaKnown RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 CHST13Q8NET6 341 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 SPPL3Q8TCT6 385 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 HNRNPLLQ8WVV9 542 aaKnown RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 ZFP91Q96JP5 570 aaPredicted RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 SLC4A5Q9BY07 1137 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 WDR11Q9BZH6 1224 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 SH2D4AQ9H788 454 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 GOPCQ9HD26 462 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 GPHNQ9NQX3 736 aaPredicted RBP6.99□□□□□ -1.29
VARS-222ENST00000470953 ZSCAN32Q9NX65 697 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 FBXO4Q9UKT5 387 aa6.99□□□□□ -1.29
VARS-222ENST00000470953 COG6Q9Y2V7 657 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms