RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 MBD4O95243 580 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 SLFN14P0C7P3 912 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 KRT5P13647 590 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 RAPGEF1Q13905 1077 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 RASA3Q14644 834 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 MAPRE2Q15555 327 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 ZNF658Q5TYW1 1059 aaPredicted RBP6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 PRPF38AQ8NAV1 312 aaKnown RBP6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 DTX3LQ8TDB6 740 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 SH3TC2Q8TF17 1288 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 NELFBQ8WX92 580 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 XAGE2Q96GT9 111 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 ZSCAN10Q96SZ4 725 aaPredicted RBP6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 AP5M1Q9H0R1 490 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 YY1AP1Q9H869 796 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 SMARCAL1Q9NZC9 954 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 VPS18Q9P253 973 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 FBXL21Q9UKT6 434 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 NFE2L3Q9Y4A8 694 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 FRMPD1Q5SYB0 1578 aa6.66□□□□□ -1.34
CCDC144A-212ENST00000470068 A0A1W2PQC6 194 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 TYW5A2RUC4 315 aaKnown RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 F6X3S4 739 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 USP17L8P0C7I0 530 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 PSMC2P35998 433 aaKnown RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 SP3Q02447 781 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 TFCP2Q12800 502 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DBN1Q16643 649 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DCUN1D2Q6PH85 259 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 FBXO18Q8NFZ0 1043 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 OTUD5Q96G74 571 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 TEX12Q9BXU0 123 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 POLE3Q9NRF9 147 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 AATFQ9NY61 560 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 BAG5Q9UL15 447 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 PACSIN2Q9UNF0 486 aaPredicted RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 A0A1B0GW55 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 BIN1O00499 593 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 S100BP04271 92 aaPredicted RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4L2P0CJ85 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4L3P0CJ86 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4L4P0CJ87 422 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4L5P0CJ88 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4L6P0CJ89 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4L7P0CJ90 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 CBX1P83916 185 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 TFDP2Q14188 446 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 SYT10Q6XYQ8 523 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 UBLCP1Q8WVY7 318 aaPredicted RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 MTBPQ96DY7 904 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 AMNQ9BXJ7 453 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 MAGEB5Q9BZ81 275 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DUX4Q9UBX2 424 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 EXOC3O60645 756 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 AFMP43652 599 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 NAA20P61599 178 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 MCM6Q14566 821 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 NAA25Q14CX7 972 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 TAF11Q15544 211 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 GIPC2Q8TF65 315 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 DDX27Q96GQ7 796 aaKnown RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 RBM41Q96IZ5 413 aaKnown RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 FAM20AQ96MK3 541 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 KANSL2Q9H9L4 492 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 NSMCE4AQ9NXX6 385 aa6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 MAP3K20Q9NYL2 800 aaKnown RBP6.65□□□□□ -1.34
CCDC144A-212ENST00000470068 MED1Q15648 1581 aaPredicted RBP6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 XDHP47989 1333 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 SYNGAP1Q96PV0 1343 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 CCL15-CCL14A0A0B4J2E2 113 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 DCDC2CA8MYV0 355 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 MEIS1O00470 390 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 SERPING1P05155 500 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 SKIP12755 728 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 CIITAP33076 1130 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 PCK1P35558 622 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 CTSWP56202 376 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 PPARAQ07869 468 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 TRIM28Q13263 835 aaKnown RBP6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 CCL15Q16663 113 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 FSCBQ5H9T9 825 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 EFL1Q7Z2Z2 1120 aaKnown RBP6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 FANCBQ8NB91 859 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 ALKBH8Q96BT7 664 aaKnown RBP6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 C2orf40Q9H1Z8 148 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 BATF3Q9NR55 127 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 BSDC1Q9NW68 430 aaPredicted RBP6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 ORC6Q9Y5N6 252 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 PTPRUQ92729 1446 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 DIP2BQ9P265 1576 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 TNKSO95271 1327 aa6.65□□□□□ -1.35
CCDC144A-212ENST00000470068 IGF2BP3O00425 579 aaKnown RBP eCLIP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 FOXN1O15353 648 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 ITGA6P23229 1130 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 STX2P32856 288 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 SLC1A4P43007 532 aa6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 CRKLP46109 303 aaKnown RBP6.64□□□□□ -1.35
CCDC144A-212ENST00000470068 TBCCQ15814 346 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms