RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 MCTP2Q6DN12 878 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 C1orf131Q8NDD1 294 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 FAM107BQ9H098 131 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 MEFVO15553 781 aaPredicted RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 FSBPO95073 299 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 HSPA9P38646 679 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 POLR2FP61218 127 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 COASYQ13057 564 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 SF3B2Q13435 895 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 CALCRLQ16602 461 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 DZIP1Q86YF9 867 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 MAPKAPK5Q8IW41 473 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 ZNF473Q8WTR7 871 aaKnown RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 COA7Q96BR5 231 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 RTFDC1Q9BY42 306 aaPredicted RBP11.34□□□□□ -0.59
SMC4-210ENST00000469762 RIOX1Q9H6W3 641 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 C6orf50Q9HD87 102 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 RNF14Q9UBS8 474 aa11.34□□□□□ -0.59
SMC4-210ENST00000469762 NR1D1P20393 614 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 FLT3P36888 993 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CDK8P49336 464 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 PPP4CP60510 307 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CFAP58Q5T655 872 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 MYCBPAPQ8TBZ2 947 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 ATP6V1G3Q96LB4 118 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 ADAMTS1Q9UHI8 967 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 COL4A3BPQ9Y5P4 624 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 ESYT2A0FGR8 921 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 PPP1R37O75864 691 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CLSTN1O94985 981 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 TDRD12Q587J7 1177 aaKnown RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 CHADLQ6NUI6 762 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 DDX42Q86XP3 938 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMC4-210ENST00000469762 OR2W6PQ8NHA6 318 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 SCFD2Q8WU76 684 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 LZTS2Q9BRK4 669 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 GNA11P29992 359 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 MDH1P40925 334 aaKnown RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 MARSP56192 900 aaKnown RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 PAK2Q13177 524 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 SFMBT2Q5VUG0 894 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CACNA2D4Q7Z3S7 1137 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 IRF2BP2Q7Z5L9 587 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 ZC3H3Q8IXZ2 948 aaKnown RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 ZNF444Q8N0Y2 327 aaPredicted RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 LRRC57Q8N9N7 239 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 CCT8L2Q96SF2 557 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
SMC4-210ENST00000469762 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 PLAAQ9Y263 795 aa11.33□□□□□ -0.6
SMC4-210ENST00000469762 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 PPARDQ03181 441 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 PDIA5Q14554 519 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 SLC9C1Q4G0N8 1177 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 NEDD1Q8NHV4 660 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 RIC8AQ9NPQ8 531 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 NENFQ9UMX5 172 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 ZNF652Q9Y2D9 606 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 A0A0G2JS52 829 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 GSCP56915 257 aaPredicted RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 FKBP3Q00688 224 aaKnown RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 PROM2Q8N271 834 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 EYA3Q99504 573 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 AJAP1Q9UKB5 411 aaPredicted RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 ACTN1P12814 892 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 HSD17B3P37058 310 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 BYSLQ13895 437 aaKnown RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 KIAA0753Q2KHM9 967 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 YTHDF3Q7Z739 585 aaKnown RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 SCFD1Q8WVM8 642 aa11.32□□□□□ -0.6
SMC4-210ENST00000469762 CNOT8Q9UFF9 292 aaKnown RBP11.32□□□□□ -0.6
SMC4-210ENST00000469762 FOCADQ5VW36 1801 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
SMC4-210ENST00000469762 ARID5AQ03989 594 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 PSMD2Q13200 908 aa11.31□□□□□ -0.6
SMC4-210ENST00000469762 ZNF571Q7Z3V5 609 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms