RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SH3GL2Q99962 352 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 EPB41L4AQ9HCS5 686 aaPredicted RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 GOLGA6AQ9NYA3 693 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 TAB2Q9NYJ8 693 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 AFG3L2Q9Y4W6 797 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 GPR75-ASB3A0A0A6YYF3 556 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 TTC26A0AVF1 554 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 LGALS16A8MUM7 142 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 OPA1O60313 960 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 TBC1D12O60347 775 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 CTNND1O60716 968 aaKnown RBP10.64□□□□□ -0.71
HDAC3-205ENST00000469550 CLSTN1O94985 981 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 PTPRAP18433 802 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 CYLC1P35663 651 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-205ENST00000469550 SKOR1P84550 965 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 ATP2C1P98194 919 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-205ENST00000469550 UBXN1Q04323 297 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 PDXDC2PQ6P474 469 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 SPATS2Q86XZ4 545 aaKnown RBP10.64□□□□□ -0.71
HDAC3-205ENST00000469550 ZNF654Q8IZM8 581 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 MICALL1Q8N3F8 863 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 ZNF507Q8TCN5 953 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 NELFBQ8WX92 580 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 NUP58Q9BVL2 599 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 RNF41Q9H4P4 317 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-205ENST00000469550 KAT14Q9H8E8 782 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 PICK1Q9NRD5 415 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 TACC3Q9Y6A5 838 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 FAM169AQ9Y6X4 670 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 MYH8P13535 1937 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 MYPNQ86TC9 1320 aa10.64□□□□□ -0.71
HDAC3-205ENST00000469550 FOCADQ5VW36 1801 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 GSG1L2A8MUP6 293 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 EIF3HO15372 352 aaKnown RBP eCLIP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 PRPF3O43395 683 aaKnown RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 CASP1P29466 404 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 BTDP43251 543 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 TRAPPC10P48553 1259 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 GSCP56915 257 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 RHBDL3P58872 404 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 CDK17Q00537 523 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 CTDSPL2Q05D32 466 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 ALS2CLQ60I27 953 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 WDR59Q6PJI9 974 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 RPAINQ86UA6 219 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 CERS3Q8IU89 383 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 CAPS2Q9BXY5 557 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 NACAP1Q9BZK3 213 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 INCENPQ9NQS7 918 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 HDAC6Q9UBN7 1215 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 TRIM10Q9UDY6 481 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 DDTLA6NHG4 134 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 ENC1O14682 589 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 GRK4P32298 578 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 DNM2P50570 870 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 FCGRTP55899 365 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 MAP3K12Q12852 859 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 PKN1Q16512 942 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 UBE2Q1Q7Z7E8 422 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 IRF2BP1Q8IU81 584 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 ZNF384Q8TF68 577 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 NOC3LQ8WTT2 800 aaKnown RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 RIN2Q8WYP3 895 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 DRC1Q96MC2 740 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 TSGA10Q9BZW7 698 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 THAP9Q9H5L6 903 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 DDX4Q9NQI0 724 aaKnown RBP10.63□□□□□ -0.71
HDAC3-205ENST00000469550 ZHX2Q9Y6X8 837 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 SIPA1L1O43166 1804 aa10.63□□□□□ -0.71
HDAC3-205ENST00000469550 CDK5RAP2Q96SN8 1893 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 IPO7O95373 1038 aaKnown RBP10.62□□□□□ -0.71
HDAC3-205ENST00000469550 RPN1P04843 607 aaKnown RBP10.62□□□□□ -0.71
HDAC3-205ENST00000469550 TNFRSF8P28908 595 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 CCT5P48643 541 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 GSTO1P78417 241 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 MECOMQ03112 1051 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 FUT2Q10981 343 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 TTC38Q5R3I4 469 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 B4GALNT4Q76KP1 1039 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 KIAA1328Q86T90 577 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 ADSSL1Q8N142 457 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 IQCDQ96DY2 449 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 PLEKHA4Q9H4M7 779 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 ABCF2Q9UG63 623 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 GRIN2DO15399 1336 aa10.62□□□□□ -0.71
HDAC3-205ENST00000469550 SRGAP2O75044 1071 aa10.61□□□□□ -0.71
HDAC3-205ENST00000469550 MBD4O95243 580 aa10.61□□□□□ -0.71
HDAC3-205ENST00000469550 MYL1P05976 194 aa10.61□□□□□ -0.71
HDAC3-205ENST00000469550 LDHCP07864 332 aa10.61□□□□□ -0.71
HDAC3-205ENST00000469550 GJB1P08034 283 aa10.61□□□□□ -0.71
HDAC3-205ENST00000469550 MYBL2P10244 700 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms