RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 POLR3CQ9BUI4 534 aaPredicted RBP21.22■□□□□ 0.99
SMC4-209ENST00000468653 PKD2L1Q9P0L9 805 aa21.22■□□□□ 0.99
SMC4-209ENST00000468653 PPP1R3GB7ZBB8 358 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 E9PMD0 336 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 PTMAP06454 111 aaKnown RBP21.21■□□□□ 0.99
SMC4-209ENST00000468653 SPATA31C1P0DKV0 1188 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 CETPP11597 493 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 VSIG10LQ86VR7 867 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 UNC45AQ9H3U1 944 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 AGO4Q9HCK5 861 aaKnown RBP21.21■□□□□ 0.99
SMC4-209ENST00000468653 DNM3Q9UQ16 869 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 PFASO15067 1338 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 A0A0G2JMZ2 1700 aa21.21■□□□□ 0.99
SMC4-209ENST00000468653 TESPA1A2RU30 521 aaPredicted RBP21.2■□□□□ 0.99
SMC4-209ENST00000468653 PLA2G4BP0C869 781 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 GTF2A2P52657 109 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 CYP4A11Q02928 519 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 DYMQ7RTS9 669 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 TRMT44Q8IYL2 757 aaKnown RBP21.2■□□□□ 0.99
SMC4-209ENST00000468653 MOV10L1Q9BXT6 1211 aaKnown RBP21.2■□□□□ 0.99
SMC4-209ENST00000468653 TUFT1Q9NNX1 390 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 BMP2KQ9NSY1 1161 aaPredicted RBP21.2■□□□□ 0.99
SMC4-209ENST00000468653 PNMA3Q9UL41 463 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 GDAQ9Y2T3 454 aa21.2■□□□□ 0.99
SMC4-209ENST00000468653 DDX39AO00148 427 aaKnown RBP21.2■□□□□ 0.98
SMC4-209ENST00000468653 CNMDO75829 334 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 SLC25A27O95847 323 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 PDE4DQ08499 809 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 MKRN3Q13064 507 aaKnown RBP21.2■□□□□ 0.98
SMC4-209ENST00000468653 NLRX1Q86UT6 975 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 DDX12PQ92771 950 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 GTPBP4Q9BZE4 634 aaKnown RBP21.2■□□□□ 0.98
SMC4-209ENST00000468653 FANCLQ9NW38 375 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 RGL1Q9NZL6 768 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 RBPJLQ9UBG7 517 aa21.2■□□□□ 0.98
SMC4-209ENST00000468653 PVALEFA0A1B0GWK0 134 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 COPB2P35606 906 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 CNNM4Q6P4Q7 775 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 KCTD17Q8N5Z5 321 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 TBC1D22BQ9NU19 505 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 CTNND2Q9UQB3 1225 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 NFE2L3Q9Y4A8 694 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 SYNRGQ9UMZ2 1314 aa21.19■□□□□ 0.98
SMC4-209ENST00000468653 STX17P56962 302 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 STIM1Q13586 685 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 EPHA7Q15375 998 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 UNC13DQ70J99 1090 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 TPH2Q8IWU9 490 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 DNERQ8NFT8 737 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 DYDC2Q96IM9 177 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 HSD17B14Q9BPX1 270 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 TXNRD2Q9NNW7 524 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 CCL15-CCL14A0A0B4J2E2 113 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 IDEP14735 1019 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 ERCC3P19447 782 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 PRCPP42785 496 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 CTTNQ14247 550 aaKnown RBP21.18■□□□□ 0.98
SMC4-209ENST00000468653 CCL15Q16663 113 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 CHADLQ6NUI6 762 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 GPBP1Q86WP2 473 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 GIMAP8Q8ND71 665 aaPredicted RBP21.18■□□□□ 0.98
SMC4-209ENST00000468653 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 MS4A4AQ96JQ5 239 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 IWS1Q96ST2 819 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 HSD3B7Q9H2F3 369 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 MAPK8IP1Q9UQF2 711 aa21.18■□□□□ 0.98
SMC4-209ENST00000468653 DHX15O43143 795 aaKnown RBP21.17■□□□□ 0.98
SMC4-209ENST00000468653 SLITRK3O94933 977 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 PSMC6P62333 389 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 CNTN2Q02246 1040 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 PAK1Q13153 545 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 ITGB3BPQ13352 177 aaPredicted RBP21.17■□□□□ 0.98
SMC4-209ENST00000468653 SPATA1Q5VX52 437 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 B3GNT9Q6UX72 402 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 MIER3Q7Z3K6 550 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.17■□□□□ 0.98
SMC4-209ENST00000468653 DRC7Q8IY82 874 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 GTF3C2Q8WUA4 911 aaPredicted RBP21.17■□□□□ 0.98
SMC4-209ENST00000468653 MED15Q96RN5 788 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 TCEAL9Q9UHQ7 104 aa21.17■□□□□ 0.98
SMC4-209ENST00000468653 POTEB2H3BUK9 544 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 PDHXO00330 501 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 MAFGO15525 162 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 STAM2O75886 525 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 SLC12A3P55017 1021 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 SPRYD7Q5W111 196 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 CST9Q5W186 159 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 ADSSL1Q8N142 457 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 SPC24Q8NBT2 197 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 NELFBQ8WX92 580 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 INPP4AQ96PE3 977 aaPredicted RBP21.16■□□□□ 0.98
SMC4-209ENST00000468653 RWDD2AQ9UIY3 292 aa21.16■□□□□ 0.98
SMC4-209ENST00000468653 ITGBL1O95965 494 aaPredicted RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 KRT18P05783 430 aaKnown RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 CYP2C8P10632 490 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 ATP1A3P13637 1013 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 MUTP22033 750 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 FANCCQ00597 558 aa21.15■□□□□ 0.98
SMC4-209ENST00000468653 TPD52L1Q16890 204 aaPredicted RBP21.15■□□□□ 0.98
SMC4-209ENST00000468653 Q3C1V9 767 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms