RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 AHDC1Q5TGY3 1603 aaPredicted RBP6.59□□□□□ -1.35
CCDC66-211ENST00000468108 ATE1O95260 518 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 ZC3H6P61129 1189 aaKnown RBP6.59□□□□□ -1.35
CCDC66-211ENST00000468108 GNAI1P63096 354 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 CLEC16AQ2KHT3 1053 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 ARSHQ5FYA8 562 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 NBPF6Q5VWK0 638 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 TMC6Q7Z403 805 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.59□□□□□ -1.35
CCDC66-211ENST00000468108 LTV1Q96GA3 475 aaPredicted RBP6.59□□□□□ -1.35
CCDC66-211ENST00000468108 NBPF4Q96M43 638 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 KIF2CQ99661 725 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 PCDHA5Q9Y5H7 936 aa6.59□□□□□ -1.35
CCDC66-211ENST00000468108 NCAPD2Q15021 1401 aa6.59□□□□□ -1.36
CCDC66-211ENST00000468108 CAMTA1Q9Y6Y1 1673 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 PLEKHG2Q9H7P9 1386 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 BUB1BO60566 1050 aaPredicted RBP6.58□□□□□ -1.36
CCDC66-211ENST00000468108 ZNF853P0CG23 659 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 RAG1P15918 1043 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 GBP1P32455 592 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 ZNF165P49910 485 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 RRP1P56182 461 aaKnown RBP6.58□□□□□ -1.36
CCDC66-211ENST00000468108 CHMP4BP1P59074 171 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 CAP1Q01518 475 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 CLCQ05315 142 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 MTHFSDQ2M296 383 aaKnown RBP6.58□□□□□ -1.36
CCDC66-211ENST00000468108 AMOTQ4VCS5 1084 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 PLEKHO1Q53GL0 409 aaPredicted RBP6.58□□□□□ -1.36
CCDC66-211ENST00000468108 OVOS1Q6IE37 1185 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 FERMT3Q86UX7 667 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 SLITRK4Q8IW52 837 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 ZNF428Q96B54 188 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 PLCD4Q9BRC7 762 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 EHMT1Q9H9B1 1298 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 USP40Q9NVE5 1235 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 IFT57Q9NWB7 429 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 GMIPQ9P107 970 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 CCDC9Q9Y3X0 531 aaKnown RBP6.58□□□□□ -1.36
CCDC66-211ENST00000468108 ABCA3Q99758 1704 aa6.58□□□□□ -1.36
CCDC66-211ENST00000468108 COL22A1Q8NFW1 1626 aaPredicted RBP6.58□□□□□ -1.36
CCDC66-211ENST00000468108 UNCXA6NJT0 531 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 MPOP05164 745 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 NCKAP1LP55160 1127 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 RNF111Q6ZNA4 994 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 REXO1Q8N1G1 1221 aaKnown RBP6.57□□□□□ -1.36
CCDC66-211ENST00000468108 RTF1Q92541 710 aaKnown RBP6.57□□□□□ -1.36
CCDC66-211ENST00000468108 HHIPL1Q96JK4 782 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 BABAM1Q9NWV8 329 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 KIAA1522Q9P206 1035 aaPredicted RBP6.57□□□□□ -1.36
CCDC66-211ENST00000468108 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
CCDC66-211ENST00000468108 LMO7Q8WWI1 1683 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 KIAA0232Q92628 1395 aa6.57□□□□□ -1.36
CCDC66-211ENST00000468108 PHLPP1O60346 1717 aa6.56□□□□□ -1.36
CCDC66-211ENST00000468108 VIRMAQ69YN4 1812 aaKnown RBP6.56□□□□□ -1.36
CCDC66-211ENST00000468108 RGS13O14921 159 aa6.56□□□□□ -1.36
CCDC66-211ENST00000468108 HMGA2P52926 109 aa6.56□□□□□ -1.36
CCDC66-211ENST00000468108 RACK1P63244 317 aaKnown RBP6.56□□□□□ -1.36
CCDC66-211ENST00000468108 PRDM11Q9NQV5 511 aa6.56□□□□□ -1.36
CCDC66-211ENST00000468108 SMPD4Q9NXE4 827 aa6.56□□□□□ -1.36
CCDC66-211ENST00000468108 FAM83GA6ND36 823 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 CHL1O00533 1208 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 POLR2BP30876 1174 aaKnown RBP6.55□□□□□ -1.36
CCDC66-211ENST00000468108 RARSP54136 660 aaKnown RBP6.55□□□□□ -1.36
CCDC66-211ENST00000468108 EXOSC9Q06265 439 aaKnown RBP6.55□□□□□ -1.36
CCDC66-211ENST00000468108 TMEM62Q0P6H9 643 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 CHRNA2Q15822 529 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 ALDH1L2Q3SY69 923 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 NT5DC1Q5TFE4 455 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 C9orf131Q5VYM1 1079 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 METTL16Q86W50 562 aaKnown RBP6.55□□□□□ -1.36
CCDC66-211ENST00000468108 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 RAPGEF4Q8WZA2 1011 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 ATG4CQ96DT6 458 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 ASPNQ9BXN1 380 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 FOXP3Q9BZS1 431 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 ANTXR1Q9H6X2 564 aa6.55□□□□□ -1.36
CCDC66-211ENST00000468108 COL14A1Q05707 1796 aaKnown RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 COL16A1Q07092 1604 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 WDR17Q8IZU2 1322 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 CRB1P82279 1406 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 UBOX5O94941 541 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 LIMS1P48059 325 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 EVA1CP58658 441 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 HDLBPQ00341 1268 aaKnown RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 DCTN1Q14203 1278 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 RAB3GAP1Q15042 981 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 TAF7Q15545 349 aaPredicted RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 CDCP2Q5VXM1 449 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 MCM10Q7L590 875 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 NLRC3Q7RTR2 1065 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 ZNF654Q8IZM8 581 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 THUMPD2Q9BTF0 503 aaKnown RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
CCDC66-211ENST00000468108 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
CCDC66-211ENST00000468108 MAP3K5Q99683 1374 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms