RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 ZNF543Q08ER8 600 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 IER5Q5VY09 327 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 IFNL3Q8IZI9 196 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 DHX38Q92620 1227 aaKnown RBP6.65□□□□□ -1.34
CXXC4-202ENST00000466963 KAT2BQ92831 832 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 GLT8D2Q9H1C3 349 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 CD320Q9NPF0 282 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 SCN5AQ14524 2016 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 LOXHD1Q8IVV2 1947 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 MYOGP15173 224 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 LTBRP36941 435 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 CES5AQ6NT32 575 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 NSMFQ6X4W1 530 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 MAMSTRQ6ZN01 415 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 AFG1LQ8WV93 481 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 FBXO4Q9UKT5 387 aa6.65□□□□□ -1.34
CXXC4-202ENST00000466963 LAMA4Q16363 1823 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 TMEM8BA6NDV4 472 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 TSPY2A6NKD2 308 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 CYP2D6P10635 497 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 NDUFV1P49821 464 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 TFAP4Q01664 338 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 GPNMBQ14956 572 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 METTL7BQ6UX53 244 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 NLRX1Q86UT6 975 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 TMEM57Q8N5G2 664 aa6.65□□□□□ -1.35
CXXC4-202ENST00000466963 LENG1Q96BZ8 264 aaPredicted RBP6.65□□□□□ -1.35
CXXC4-202ENST00000466963 PTPDC1A2A3K4 754 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 HIP1O00291 1037 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 DGKIO75912 1065 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 CREMQ03060 361 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 LMNB2Q03252 620 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 ZNF618Q5T7W0 954 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 KIAA0319Q5VV43 1072 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 STOX1Q6ZVD7 989 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 SHDQ96IW2 340 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 LZTS2Q9BRK4 669 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 MRPL9Q9BYD2 267 aaKnown RBP6.64□□□□□ -1.35
CXXC4-202ENST00000466963 ANTXR1Q9H6X2 564 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 PLAGL2Q9UPG8 496 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 ZNF318Q5VUA4 2279 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 GPAA1O43292 621 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 FIBPO43427 364 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 TBC1D4O60343 1298 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 SARSP49591 514 aaKnown RBP6.64□□□□□ -1.35
CXXC4-202ENST00000466963 RPS6P62753 249 aaKnown RBP6.64□□□□□ -1.35
CXXC4-202ENST00000466963 ADAM17P78536 824 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 DEFB103AP81534 67 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 ZMYM1Q5SVZ6 1142 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 KIAA1841Q6NSI8 718 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 ANKRD54Q6NXT1 300 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 C1orf228Q6PIY5 440 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 MSANTD3Q96H12 275 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 CNNM2Q9H8M5 875 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 HDAC6Q9UBN7 1215 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 WNT16Q9UBV4 365 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 IRAK3Q9Y616 596 aa6.64□□□□□ -1.35
CXXC4-202ENST00000466963 MBLAC1A4D2B0 266 aaPredicted RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 KIAA0753Q2KHM9 967 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 OTOP3Q7RTS5 596 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 ATP6V0A1Q93050 837 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 ACSF2Q96CM8 615 aaPredicted RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 GPRASP2Q96D09 838 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 CTAGE1Q96RT6 745 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 IFIH1Q9BYX4 1025 aaKnown RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 DLL3Q9NYJ7 618 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 TRPC6Q9Y210 931 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 PPME1Q9Y570 386 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 MRVI1Q9Y6F6 885 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 LMNAP02545 664 aaKnown RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 MUM1L1Q5H9M0 696 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 ARHGEF16Q5VV41 709 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 MYSM1Q5VVJ2 828 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 DBF4BQ8NFT6 615 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 SYTL5Q8TDW5 730 aaPredicted RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 ESR2Q92731 530 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 STAMQ92783 540 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 MTMR8Q96EF0 704 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 AMNQ9BXJ7 453 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 ALG13Q9NP73 1137 aaKnown RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 PDGFCQ9NRA1 345 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 USP15Q9Y4E8 981 aaPredicted RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 AOC1P19801 751 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 RRP1P56182 461 aaKnown RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 KRT17Q04695 432 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 MGAT3Q09327 533 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 BTG3Q14201 252 aaPredicted RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 DGLUCYQ7Z3D6 616 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 VSIG10LQ86VR7 867 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 IQCA1Q86XH1 822 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 SPPL3Q8TCT6 385 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 NELL2Q99435 816 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 C17orf80Q9BSJ5 609 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 ADAM7Q9H2U9 754 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 PXMP2Q9NR77 195 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 TLR7Q9NYK1 1049 aaKnown RBP6.63□□□□□ -1.35
CXXC4-202ENST00000466963 MUTYHQ9UIF7 546 aa6.63□□□□□ -1.35
CXXC4-202ENST00000466963 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 H3BRB1 525 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 RFXAPO00287 272 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms