RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 MOXD2PA6NHM9 499 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 ASGR1P07306 291 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 SYT1P21579 422 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 ACLYP53396 1101 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 HSDL1Q3SXM5 330 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 PPP4R3AQ6IN85 833 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 UBE2Q1Q7Z7E8 422 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 PPTC7Q8NI37 304 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 SDF4Q9BRK5 362 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 C11orf49Q9H6J7 331 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 PHF24Q9UPV7 400 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 NFASCO94856 1347 aa16.4■□□□□ 0.22
DNMT3A-208ENST00000466601 VPS37CA5D8V6 355 aaPredicted RBP16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 IPO5O00410 1097 aaKnown RBP16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 MSH4O15457 936 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 MMP3P08254 477 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 COL6A1P12109 1028 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 ITGB3BPQ13352 177 aaPredicted RBP16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 FERMT2Q96AC1 680 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 UIMC1Q96RL1 719 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 SENP6Q9GZR1 1112 aaPredicted RBP16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
DNMT3A-208ENST00000466601 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 SLC37A4O43826 429 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 KPNA6O60684 536 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 MYL3P08590 195 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 SP4Q02446 784 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 DGKDQ16760 1214 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 CXCL17Q6UXB2 119 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 JPH1Q9HDC5 661 aaPredicted RBP16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 TBC1D22BQ9NU19 505 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 SLC9A2Q9UBY0 812 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 BRCA2P51587 3418 aa16.38■□□□□ 0.21
DNMT3A-208ENST00000466601 A0A1W2PQ45 241 aaPredicted RBP16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 A0A1W2PQY0 241 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 DDX39AO00148 427 aaKnown RBP16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 WNT7AO00755 349 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 DHX15O43143 795 aaKnown RBP16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 STX6O43752 255 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 PPFIA4O75335 1185 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 CABYRO75952 493 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 TRAPPC10P48553 1259 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 PURAQ00577 322 aaKnown RBP16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 SEPT1Q8WYJ6 367 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 GLT1D1Q96MS3 346 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 GPR20Q99678 358 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
DNMT3A-208ENST00000466601 HOXD8P13378 290 aaPredicted RBP16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 RGS19P49795 217 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 TTC38Q5R3I4 469 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 ETNPPLQ8TBG4 499 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 SLC5A5Q92911 643 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 GJA10Q969M2 543 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 VTI1AQ96AJ9 217 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 RIT2Q99578 217 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 MTG1Q9BT17 334 aaPredicted RBP16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
DNMT3A-208ENST00000466601 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 TBX3O15119 743 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 MARCH6O60337 910 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 NEMFO60524 1076 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 GAS7O60861 476 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 MCM7P33993 719 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 TOB1P50616 345 aaPredicted RBP16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 ACTR2P61160 394 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 ZNF174Q15697 407 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 LRCH2Q5VUJ6 765 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 FERMT3Q86UX7 667 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 FAM20AQ96MK3 541 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 KCNMB3Q9NPA1 279 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 TCEAL9Q9UHQ7 104 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 ELP1O95163 1332 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
DNMT3A-208ENST00000466601 PSMD10O75832 226 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 BAG4O95429 457 aaKnown RBP16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 CCNE2O96020 404 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 TCF7P36402 384 aaPredicted RBP16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 KRT76Q01546 638 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 ORC2Q13416 577 aaPredicted RBP16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 CALCRLQ16602 461 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 UTP14CQ5TAP6 766 aaKnown RBP16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 ZNF746Q6NUN9 644 aaPredicted RBP16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 BRAPQ7Z569 592 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 HAS1Q92839 578 aa16.34■□□□□ 0.21
DNMT3A-208ENST00000466601 A0A0U1RQG5 324 aaPredicted RBP16.33■□□□□ 0.2
DNMT3A-208ENST00000466601 ATG7O95352 703 aa16.33■□□□□ 0.2
DNMT3A-208ENST00000466601 LGALS2P05162 132 aa16.33■□□□□ 0.2
DNMT3A-208ENST00000466601 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms