RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 PARNO95453 639 aaKnown RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 HLA-DOAP06340 250 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 PTPRAP18433 802 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 HOXD10P28358 340 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 NRLP54845 237 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 PABPC4Q13310 644 aaKnown RBP eCLIP7.73□□□□□ -1.17
TPM3-214ENST00000466010 POTEGQ6S5H5 508 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 DHX32Q7L7V1 743 aaKnown RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 PRRT2Q7Z6L0 340 aaPredicted RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 AACSQ86V21 672 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 TEX11Q8IYF3 940 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 RPUSD2Q8IZ73 545 aaKnown RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 FAM43AQ8N2R8 423 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 PRPF38AQ8NAV1 312 aaKnown RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 RBBP8NLQ8NC74 664 aaPredicted RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.73□□□□□ -1.17
TPM3-214ENST00000466010 NSUN5Q96P11 429 aaKnown RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 DBNDD2Q9BQY9 259 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.73□□□□□ -1.17
TPM3-214ENST00000466010 BRMS1Q9HCU9 246 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 ZBTB40Q9NUA8 1239 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 MARK1Q9P0L2 795 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 DBNLQ9UJU6 430 aaKnown RBP7.73□□□□□ -1.17
TPM3-214ENST00000466010 PTPN22Q9Y2R2 807 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 PCDHB5Q9Y5E4 795 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 ZHX2Q9Y6X8 837 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 MYH2Q9UKX2 1941 aa7.73□□□□□ -1.17
TPM3-214ENST00000466010 DDTLA6NHG4 134 aaPredicted RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 FIGNL2A6NMB9 653 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 PDHXO00330 501 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 IDH1O75874 414 aaKnown RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 DDAH1O94760 285 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 ASNSP08243 561 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 IFIT2P09913 472 aaKnown RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 NME2P22392 152 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 LACTBP83111 547 aaPredicted RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 AMPD3Q01432 767 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 SPEM2Q0P670 501 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 SEPT6Q14141 434 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 LSRQ86X29 649 aaPredicted RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 FOXP4Q8IVH2 680 aaPredicted RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 C19orf47Q8N9M1 422 aaKnown RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 CD99L2Q8TCZ2 262 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 ZNF384Q8TF68 577 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 BHMTQ93088 406 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 EAF2Q96CJ1 260 aaPredicted RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 CEP89Q96ST8 783 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 EMILIN2Q9BXX0 1053 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 CLEC4MQ9H2X3 399 aaPredicted RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 R3HDMLQ9H3Y0 253 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 AS3MTQ9HBK9 375 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 DDX4Q9NQI0 724 aaKnown RBP7.72□□□□□ -1.17
TPM3-214ENST00000466010 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 EXOC6BQ9Y2D4 811 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 AFG3L2Q9Y4W6 797 aa7.72□□□□□ -1.17
TPM3-214ENST00000466010 MAST2Q6P0Q8 1798 aa7.71□□□□□ -1.17
TPM3-214ENST00000466010 DOCK2Q92608 1830 aa7.71□□□□□ -1.17
TPM3-214ENST00000466010 GHRHP01286 108 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 CAPN2P17655 700 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 MASP1P48740 699 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 FAAP100Q0VG06 881 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 SQSTM1Q13501 440 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 SLC9C1Q4G0N8 1177 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 LLGL2Q6P1M3 1020 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 C17orf99Q6UX52 265 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 ZFPM1Q8IX07 1006 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 CRACR2BQ8N4Y2 399 aaPredicted RBP7.71□□□□□ -1.18
TPM3-214ENST00000466010 ST13P5Q8NFI4 369 aaPredicted RBP7.71□□□□□ -1.18
TPM3-214ENST00000466010 ZNF669Q96BR6 464 aaPredicted RBP7.71□□□□□ -1.18
TPM3-214ENST00000466010 CCDC136Q96JN2 1154 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.71□□□□□ -1.18
TPM3-214ENST00000466010 CCDC8Q9H0W5 538 aaPredicted RBP7.71□□□□□ -1.18
TPM3-214ENST00000466010 AATFQ9NY61 560 aaKnown RBP eCLIP7.71□□□□□ -1.18
TPM3-214ENST00000466010 FLT1P17948 1338 aa7.71□□□□□ -1.18
TPM3-214ENST00000466010 AK9Q5TCS8 1911 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 SMNDC1O75940 238 aaKnown RBP eCLIP7.7□□□□□ -1.18
TPM3-214ENST00000466010 GJB6O95452 261 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 CYP7A1P22680 504 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 CAP2P40123 477 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 GCLCP48506 637 aaPredicted RBP7.7□□□□□ -1.18
TPM3-214ENST00000466010 SOX10P56693 466 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 GPLD1P80108 840 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 PRR20EP86478 221 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 PRR20CP86479 221 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 PRR20DP86480 221 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 PRR20BP86481 221 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 PRR20AP86496 221 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 SSRP1Q08945 709 aaKnown RBP7.7□□□□□ -1.18
TPM3-214ENST00000466010 PCSK7Q16549 785 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
TPM3-214ENST00000466010 SCARA3Q6AZY7 606 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 SH3RF3Q8TEJ3 882 aaPredicted RBP7.7□□□□□ -1.18
TPM3-214ENST00000466010 SMCR8Q8TEV9 937 aaPredicted RBP7.7□□□□□ -1.18
TPM3-214ENST00000466010 PBX4Q9BYU1 374 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 CBX8Q9HC52 389 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 AGTPBP1Q9UPW5 1226 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 SLC12A7Q9Y666 1083 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 PTCH2Q9Y6C5 1203 aa7.7□□□□□ -1.18
TPM3-214ENST00000466010 TNRC18O15417 2968 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms