RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 DTLQ9NZJ0 730 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
PTCD3-205ENST00000464541 NKRFO15226 690 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTCD3-205ENST00000464541 DNAJC8O75937 253 aaPredicted RBP8.69□□□□□ -1.02
PTCD3-205ENST00000464541 CKMP06732 381 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 PYGMP11217 842 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 COL6A2P12110 1019 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 FLT3P36888 993 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 DDX53Q86TM3 631 aaKnown RBP8.69□□□□□ -1.02
PTCD3-205ENST00000464541 DDX11Q96FC9 970 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 TOE1Q96GM8 510 aaKnown RBP8.69□□□□□ -1.02
PTCD3-205ENST00000464541 GOLGA2P5Q9HBQ8 144 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 KCTD3Q9Y597 815 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 CD2APQ9Y5K6 639 aa8.69□□□□□ -1.02
PTCD3-205ENST00000464541 DBX1A6NMT0 343 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 NPIPB6E9PJ23 425 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 SLC27A2O14975 620 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 CYP2C8P10632 490 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 PDE6AP16499 860 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 FOXO4P98177 505 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 ZNF124Q15973 351 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 TKFCQ3LXA3 575 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 FIGNQ5HY92 759 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 ARHGAP36Q6ZRI8 547 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 KCTD1Q719H9 257 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 TMEM151BQ8IW70 566 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 TMEFF1Q8IYR6 380 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 ARRDC4Q8NCT1 418 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 TOX2Q96NM4 488 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 CBLCQ9ULV8 474 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 SRPK3Q9UPE1 567 aa8.68□□□□□ -1.02
PTCD3-205ENST00000464541 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 OPA1O60313 960 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTCD3-205ENST00000464541 KCNA6P17658 529 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 GJA4P35212 333 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 DNM2P50570 870 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 NKX3-2P78367 333 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 TUSC3Q13454 348 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 ZCCHC8Q6NZY4 707 aaKnown RBP8.67□□□□□ -1.02
PTCD3-205ENST00000464541 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.67□□□□□ -1.02
PTCD3-205ENST00000464541 FAM129CQ86XR2 697 aa8.67□□□□□ -1.02
PTCD3-205ENST00000464541 C8BP07358 591 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 PI3P19957 117 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 MC3RP41968 323 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 SSPNQ14714 243 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 CNKSR3Q6P9H4 555 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 HHIPL2Q6UWX4 724 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 EP400NLQ6ZTU2 488 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 CILP2Q8IUL8 1156 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 NIM1KQ8IY84 436 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 SMARCC2Q8TAQ2 1214 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 COQ6Q9Y2Z9 468 aa8.66□□□□□ -1.02
PTCD3-205ENST00000464541 TNPO3Q9Y5L0 923 aaKnown RBP8.66□□□□□ -1.02
PTCD3-205ENST00000464541 TCRBV5S4A2TA0A5A2 114 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 CLSTN1O94985 981 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 AMY2AP04746 511 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 AMY2BP19961 511 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 SDSP20132 328 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 CR1LQ2VPA4 569 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 TMEM177Q53S58 311 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 DALRD3Q5D0E6 543 aaKnown RBP8.65□□□□□ -1.02
PTCD3-205ENST00000464541 CIAPIN1Q6FI81 312 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 CD300LDQ6UXZ3 194 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 UBE2R2Q712K3 238 aaPredicted RBP8.65□□□□□ -1.02
PTCD3-205ENST00000464541 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 OSTM1Q86WC4 334 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 IGSF22Q8N9C0 903 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 SH3RF2Q8TEC5 729 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 CLEC4DQ8WXI8 215 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 MFSD3Q96ES6 412 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 EPB41L4AQ9HCS5 686 aaPredicted RBP8.65□□□□□ -1.02
PTCD3-205ENST00000464541 ATP23Q9Y6H3 246 aa8.65□□□□□ -1.02
PTCD3-205ENST00000464541 MAN2B1O00754 1011 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 POU3F2P20265 443 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-205ENST00000464541 LIMS1P48059 325 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 JAM2P57087 298 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 HTRA3P83110 453 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 ARHGAP44Q17R89 818 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 ABHD17CQ6PCB6 329 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 TEPPQ6URK8 271 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 SLKQ9H2G2 1235 aaPredicted RBP8.64□□□□□ -1.03
PTCD3-205ENST00000464541 SMURF1Q9HCE7 757 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 PMF1-BGLAPU3KQ54 211 aa8.64□□□□□ -1.03
PTCD3-205ENST00000464541 NUAK1O60285 661 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 CLASP2O75122 1294 aaKnown RBP8.63□□□□□ -1.03
PTCD3-205ENST00000464541 LRG1P02750 347 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 FAHP16930 419 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 STAT5AP42229 794 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 PAN2Q504Q3 1202 aaKnown RBP8.63□□□□□ -1.03
PTCD3-205ENST00000464541 PTRH1Q86Y79 214 aaKnown RBP8.63□□□□□ -1.03
PTCD3-205ENST00000464541 TTLL6Q8N841 843 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 ZSCAN18Q8TBC5 510 aaPredicted RBP8.63□□□□□ -1.03
PTCD3-205ENST00000464541 DACT3Q96B18 629 aaPredicted RBP8.63□□□□□ -1.03
PTCD3-205ENST00000464541 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 ORAI3Q9BRQ5 295 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 CD244Q9BZW8 370 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 TMX1Q9H3N1 280 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 SAMD15Q9P1V8 674 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms