RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 FAM186BQ8IYM0 893 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 KCPQ6ZWJ8 1503 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 EIF2AK2P19525 551 aaKnown RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 CYP2J2P51589 502 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 ZRSR2Q15696 482 aaKnown RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 DEFB132Q7Z7B7 95 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 TXNRD3Q86VQ6 643 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 SCYL3Q8IZE3 742 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 UBE2Q2Q8WVN8 375 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 CALR3Q96L12 384 aaKnown RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 CCDC77Q9BR77 488 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 RPAP3Q9H6T3 665 aaPredicted RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 PRR12Q9ULL5 1215 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 QARSP47897 775 aaKnown RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 VAV2P52735 878 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 YARSP54577 528 aaKnown RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 DACT2Q5SW24 774 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 STMN4Q9H169 189 aaPredicted RBP12.91□□□□□ -0.34
RBM39-223ENST00000463004 LRP6O75581 1613 aa12.91□□□□□ -0.34
RBM39-223ENST00000463004 SHTN1A0MZ66 631 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
RBM39-223ENST00000463004 NEFHP12036 1026 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
RBM39-223ENST00000463004 CAP2P40123 477 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 ZBED6P86452 979 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 NAALADL2Q58DX5 795 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 RIT2Q99578 217 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 RAVER2Q9HCJ3 691 aaKnown RBP12.9□□□□□ -0.34
RBM39-223ENST00000463004 FAM207AQ9NSI2 230 aaPredicted RBP12.9□□□□□ -0.34
RBM39-223ENST00000463004 LRRC4BQ9NT99 713 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 PRPF6O94906 941 aaKnown RBP12.9□□□□□ -0.34
RBM39-223ENST00000463004 PSMC5P62195 406 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 EDEM3Q9BZQ6 932 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 DEFB129Q9H1M3 183 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 PFASO15067 1338 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 LRRIQ4A6NIV6 560 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.347e-33■■□□□ 11.8
RBM39-223ENST00000463004 DNA2P51530 1060 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 MFAP3P55082 362 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 POMGNT1Q8WZA1 660 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.34
RBM39-223ENST00000463004 MAD2L2Q9UI95 211 aa12.9□□□□□ -0.34
RBM39-223ENST00000463004 ARHGEF37A1IGU5 675 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 MACROD2A1Z1Q3 448 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 EYA4O95677 639 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 CHGBP05060 677 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 ANKRD13AQ8IZ07 590 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 NT5C1BQ96P26 610 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 GJB4Q9NTQ9 266 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 TRPM3Q9HCF6 1732 aaPredicted RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 OPA1O60313 960 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 GUCY1A2P33402 732 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 WHAMMP3Q1A5X7 153 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 BHMT2Q9H2M3 363 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 MTRF1LQ9UGC7 380 aaKnown RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 FEZ2Q9UHY8 353 aaPredicted RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 TMX2Q9Y320 296 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 HSF2BPO75031 334 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 CACTINQ8WUQ7 758 aaKnown RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 IBSPP21815 317 aaPredicted RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 MYL7Q01449 175 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 INTS8Q75QN2 995 aaKnown RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 RIOX1Q9H6W3 641 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 ODF2LQ9ULJ1 636 aa12.89□□□□□ -0.35
RBM39-223ENST00000463004 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
RBM39-223ENST00000463004 ETF1P62495 437 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 C7orf25Q9BPX7 421 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 C2orf40Q9H1Z8 148 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 GOLPH3LQ9H4A5 285 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 SPOPO43791 374 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 FCER1AP12319 257 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 POLR2BP30876 1174 aaKnown RBP12.88□□□□□ -0.35
RBM39-223ENST00000463004 CXCL9Q07325 125 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 SNAPC2Q13487 334 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 TCP11X2Q5H9J9 407 aa12.88□□□□□ -0.35
RBM39-223ENST00000463004 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms