RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 TPTE2Q6XPS3 522 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 Q7L0L9 218 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 NLRX1Q86UT6 975 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 LINC01356Q8N9X3 169 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 TP53I13Q8NBR0 393 aaPredicted RBP3.95□□□□□ -1.78
CD46-210ENST00000462968 PPP1R13LQ8WUF5 828 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 LINC01599Q8WXQ3 324 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 ZNF333Q96JL9 665 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 PUS7Q96PZ0 661 aaKnown RBP3.95□□□□□ -1.78
CD46-210ENST00000462968 GPR20Q99678 358 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 HTATIP2Q9BUP3 242 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 BCL2L13Q9BXK5 485 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 TUT1Q9H6E5 874 aaKnown RBP3.95□□□□□ -1.78
CD46-210ENST00000462968 GPATCH2Q9NW75 528 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 CNOT7Q9UIV1 285 aaKnown RBP3.95□□□□□ -1.78
CD46-210ENST00000462968 ZNRF3Q9ULT6 936 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 SNCAIPQ9Y6H5 919 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 LAMA3Q16787 3333 aa3.95□□□□□ -1.78
CD46-210ENST00000462968 SPTBN5Q9NRC6 3674 aaKnown RBP3.94□□□□□ -1.78
CD46-210ENST00000462968 ITGB4P16144 1822 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 WTIPA6NIX2 430 aaPredicted RBP3.94□□□□□ -1.78
CD46-210ENST00000462968 ADM5C9JUS6 153 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 PPIP5K2O43314 1243 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 PRICKLE3O43900 615 aaPredicted RBP3.94□□□□□ -1.78
CD46-210ENST00000462968 STARD3NLO95772 234 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 ETV3P41162 512 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 YBX1P67809 324 aaKnown RBP3.94□□□□□ -1.78
CD46-210ENST00000462968 ZXDAP98168 799 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 AMOTQ4VCS5 1084 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 ZFYVE27Q5T4F4 411 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 CNKSR3Q6P9H4 555 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.94□□□□□ -1.78
CD46-210ENST00000462968 NBPF5PQ86XG9 351 aaPredicted RBP3.94□□□□□ -1.78
CD46-210ENST00000462968 FAM129CQ86XR2 697 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 GLYCTKQ8IVS8 523 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 ANKS4BQ8N8V4 417 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 GAL3ST3Q96A11 431 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 ERO1AQ96HE7 468 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 G6PC3Q9BUM1 346 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 R3HDMLQ9H3Y0 253 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 SIRT5Q9NXA8 310 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 PPM1HQ9ULR3 514 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 CENPFP49454 3210 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 SNED1Q8TER0 1413 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 RPTORQ8N122 1335 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 TRIOBPQ9H2D6 2365 aa3.94□□□□□ -1.78
CD46-210ENST00000462968 COL5A3P25940 1745 aaPredicted RBP3.93□□□□□ -1.78
CD46-210ENST00000462968 MON2Q7Z3U7 1717 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 CCDC88AQ3V6T2 1871 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 PPM1GO15355 546 aaPredicted RBP3.93□□□□□ -1.78
CD46-210ENST00000462968 CAMTA2O94983 1202 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 VIPR1P32241 457 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 GRK4P32298 578 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 BMP8BP34820 402 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 CDK8P49336 464 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 CDR1P51861 262 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 INHBEP58166 350 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 TEKQ02763 1124 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 MAP3K12Q12852 859 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 DUSP4Q13115 394 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 ARHGEF6Q15052 776 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 LRIT3Q3SXY7 679 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 SLC9C1Q4G0N8 1177 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 C1orf141Q5JVX7 400 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 WIPI1Q5MNZ9 446 aaPredicted RBP3.93□□□□□ -1.78
CD46-210ENST00000462968 ADGRF1Q5T601 910 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 ZNF530Q6P9A1 599 aaPredicted RBP3.93□□□□□ -1.78
CD46-210ENST00000462968 NPM2Q86SE8 214 aaKnown RBP3.93□□□□□ -1.78
CD46-210ENST00000462968 MRPL41Q8IXM3 137 aaKnown RBP3.93□□□□□ -1.78
CD46-210ENST00000462968 DTWD2Q8NBA8 298 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 DPF2Q92785 391 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 CDCA5Q96FF9 252 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 DMRTB1Q96MA1 342 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 STAP2Q9UGK3 403 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 SLX4Q8IY92 1834 aa3.93□□□□□ -1.78
CD46-210ENST00000462968 COL4A5P29400 1685 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 SLC24A1O60721 1099 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 FBXO24O75426 580 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 RAD17O75943 681 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 IL6STP40189 918 aaPredicted RBP3.92□□□□□ -1.78
CD46-210ENST00000462968 SERPINB4P48594 390 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 PLCB3Q01970 1234 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 CRY2Q49AN0 593 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD46-210ENST00000462968 TBC1D10BQ4KMP7 808 aaPredicted RBP3.92□□□□□ -1.78
CD46-210ENST00000462968 PCNX4Q63HM2 1172 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 CLEC4GQ6UXB4 293 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 IGDCC3Q8IVU1 814 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 SUPT20HQ8NEM7 779 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 CD99L2Q8TCZ2 262 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 MZB1Q8WU39 189 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 TMX4Q9H1E5 349 aaPredicted RBP3.92□□□□□ -1.78
CD46-210ENST00000462968 SLC52A2Q9HAB3 445 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 TJP2Q9UDY2 1190 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 MYH14Q7Z406 1995 aaKnown RBP3.92□□□□□ -1.78
CD46-210ENST00000462968 TRPM7Q96QT4 1865 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 MRC1P22897 1456 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 MUC3AQ02505 3323 aa3.92□□□□□ -1.78
CD46-210ENST00000462968 ROCK2O75116 1388 aaKnown RBP3.91□□□□□ -1.78
CD46-210ENST00000462968 RAB3GAP2Q9H2M9 1393 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms