RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.31■□□□□ 0.84
HPS3-204ENST00000462030 NT5C2P49902 561 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 COASYQ13057 564 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 CDC37Q16543 378 aaPredicted RBP20.3■□□□□ 0.84
HPS3-204ENST00000462030 SLC18A3Q16572 532 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 KIAA0753Q2KHM9 967 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 EYA3Q99504 573 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 PLAAQ9Y263 795 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 FKBP3Q00688 224 aaKnown RBP20.3■□□□□ 0.84
HPS3-204ENST00000462030 PPARDQ03181 441 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 SWT1Q5T5J6 900 aaKnown RBP20.3■□□□□ 0.84
HPS3-204ENST00000462030 EMC10Q5UCC4 262 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 MAATS1Q7Z4T9 603 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 PROM2Q8N271 834 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 USP38Q8NB14 1042 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 WHAMMQ8TF30 809 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 SYN2Q92777 582 aaPredicted RBP20.3■□□□□ 0.84
HPS3-204ENST00000462030 CEP89Q96ST8 783 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 ANKRD2Q9GZV1 360 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 TBC1D7Q9P0N9 293 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 ADAMTS1Q9UHI8 967 aa20.3■□□□□ 0.84
HPS3-204ENST00000462030 MNAT1P51948 309 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 HDLBPQ00341 1268 aaKnown RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 ORC2Q13416 577 aaPredicted RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 TMEM119Q4V9L6 283 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 CEP85LQ5SZL2 805 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 FAM133AQ8N9E0 248 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 GJA10Q969M2 543 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 COA7Q96BR5 231 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 DNAJC19Q96DA6 116 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 NUCKS1Q9H1E3 243 aaKnown RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 IRS2Q9Y4H2 1338 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 DDX60LQ5H9U9 1706 aaKnown RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 MDH1P40925 334 aaKnown RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 PSMD2Q13200 908 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 ITGB3BPQ13352 177 aaPredicted RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 KCTD19Q17RG1 926 aaPredicted RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 KRT79Q5XKE5 535 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 GOLPH3Q9H4A6 298 aa20.29■□□□□ 0.84
HPS3-204ENST00000462030 LUC7LQ9NQ29 371 aaKnown RBP20.29■□□□□ 0.84
HPS3-204ENST00000462030 CDK8P49336 464 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 KCNQ4P56696 695 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 ERVK-9P63128 1117 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 NLRP14Q86W24 1093 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 NELFCDQ8IXH7 590 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 MYCBPAPQ8TBZ2 947 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 CCT8L2Q96SF2 557 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 USP17L5A8MUK1 530 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 CLSTN1O94985 981 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 FSBPO95073 299 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 MYBP10242 640 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 HPDP32754 393 aaPredicted RBP20.28■□□□□ 0.84
HPS3-204ENST00000462030 HSPA9P38646 679 aaKnown RBP20.28■□□□□ 0.84
HPS3-204ENST00000462030 PTPROQ16827 1216 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 ARHGAP27Q6ZUM4 889 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 CEP95Q96GE4 821 aa20.28■□□□□ 0.84
HPS3-204ENST00000462030 FRMPD2Q68DX3 1309 aaPredicted RBP20.27■□□□□ 0.84
HPS3-204ENST00000462030 CDK5RAP2Q96SN8 1893 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 ESYT2A0FGR8 921 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 HMGB1P1B2RPK0 211 aaPredicted RBP20.27■□□□□ 0.84
HPS3-204ENST00000462030 H0YHG0 523 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 ECHS1P30084 290 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 TNNC1P63316 161 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 KLHL30Q0D2K2 578 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 DDB1Q16531 1140 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 FAM26FQ5R3K3 315 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 SPATS2Q86XZ4 545 aaKnown RBP20.27■□□□□ 0.84
HPS3-204ENST00000462030 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
HPS3-204ENST00000462030 PROCA1Q8NCQ7 364 aaPredicted RBP20.27■□□□□ 0.84
HPS3-204ENST00000462030 PAGR1Q9BTK6 254 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 TMEM59LQ9UK28 342 aa20.27■□□□□ 0.84
HPS3-204ENST00000462030 KCNK3O14649 394 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 HLTFQ14527 1009 aaKnown RBP eCLIP20.27■□□□□ 0.83
HPS3-204ENST00000462030 DNAAF5Q86Y56 855 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 OR2W6PQ8NHA6 318 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 NLRP3Q96P20 1036 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 RAB34Q9BZG1 259 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 CENPHQ9H3R5 247 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 TAF1DQ9H5J8 278 aaPredicted RBP20.27■□□□□ 0.83
HPS3-204ENST00000462030 TMBIM4Q9HC24 238 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 PANK4Q9NVE7 773 aa20.27■□□□□ 0.83
HPS3-204ENST00000462030 COL5A3P25940 1745 aaPredicted RBP20.26■□□□□ 0.83
HPS3-204ENST00000462030 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 BAG3O95817 575 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 PDIA5Q14554 519 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 TRIM59Q8IWR1 403 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 NEDD1Q8NHV4 660 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.26■□□□□ 0.83
HPS3-204ENST00000462030 SSBP05455 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
HPS3-204ENST00000462030 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
HPS3-204ENST00000462030 FOXR2Q6PJQ5 311 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 DDX42Q86XP3 938 aaKnown RBP eCLIP20.26■□□□□ 0.83
HPS3-204ENST00000462030 LINC00116Q8NCU8 138 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 NCAPGQ9BPX3 1015 aa20.26■□□□□ 0.83
HPS3-204ENST00000462030 E7EVH7 732 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 HSD17B3P37058 310 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 TNNI2P48788 182 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 ADCY7P51828 1080 aa20.25■□□□□ 0.83
HPS3-204ENST00000462030 UAP1Q16222 522 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms