RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 KAT2BQ92831 832 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 MAF1Q9H063 256 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 EPHX3Q9H6B9 360 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
SF3A3-203ENST00000461869 PRRC2BQ5JSZ5 2229 aaKnown RBP17.82■□□□□ 0.44
SF3A3-203ENST00000461869 ABCB11O95342 1321 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 CCDC196A0A1B0GTZ2 297 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 GOLGA8AA7E2F4 631 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 CPLX1O14810 134 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 CDKL5O76039 1030 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 DDAH1O94760 285 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 PARNO95453 639 aaKnown RBP17.82■□□□□ 0.44
SF3A3-203ENST00000461869 PDCP20941 246 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 DEFB103AP81534 67 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 ST3GAL1Q11201 340 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 STXBP2Q15833 593 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 DGKDQ16760 1214 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 CNKSR3Q6P9H4 555 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 C7orf31Q8N865 590 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 DHX38Q92620 1227 aaKnown RBP17.82■□□□□ 0.44
SF3A3-203ENST00000461869 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 RMDN3Q96TC7 470 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 COL20A1Q9P218 1284 aa17.82■□□□□ 0.44
SF3A3-203ENST00000461869 XIRP2A4UGR9 3374 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 NBNO60934 754 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 CXCL10P02778 98 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 CKBP12277 381 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 RBL2Q08999 1139 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 MICU3Q86XE3 530 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 MCF2L2Q86YR7 1114 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 ADGRF4Q8IZF3 695 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 ZNF654Q8IZM8 581 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 ANKS1AQ92625 1134 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 ALG1Q9BT22 464 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 LRFN3Q9BTN0 628 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 LMCD1Q9NZU5 365 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 GTF2IRD1Q9UHL9 959 aa17.81■□□□□ 0.44
SF3A3-203ENST00000461869 ABHD14A-ACY1A0A1B0GW23 586 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 GJB2P29033 226 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 PSEN2P49810 448 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 ARHGEF16Q5VV41 709 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 RAD9AQ99638 391 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 KATNAL1Q9BW62 490 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
SF3A3-203ENST00000461869 MTUS1Q9ULD2 1270 aa17.8■□□□□ 0.44
SF3A3-203ENST00000461869 GJB5O95377 273 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 EIF2AK2P19525 551 aaKnown RBP17.79■□□□□ 0.44
SF3A3-203ENST00000461869 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
SF3A3-203ENST00000461869 IKBKEQ14164 716 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 MFSD10Q14728 455 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 RTN1Q16799 776 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 TCTN1Q2MV58 587 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 TMEM31Q5JXX7 168 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 TET1Q8NFU7 2136 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 EMID1Q96A84 441 aaPredicted RBP17.79■□□□□ 0.44
SF3A3-203ENST00000461869 TGS1Q96RS0 853 aaKnown RBP17.79■□□□□ 0.44
SF3A3-203ENST00000461869 MAP3K14Q99558 947 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 RBM28Q9NW13 759 aaKnown RBP17.79■□□□□ 0.44
SF3A3-203ENST00000461869 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
SF3A3-203ENST00000461869 HCN4Q9Y3Q4 1203 aa17.79■□□□□ 0.44
SF3A3-203ENST00000461869 EFCAB14O75071 495 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 EIF3JO75822 258 aaKnown RBP17.78■□□□□ 0.44
SF3A3-203ENST00000461869 PTK7Q13308 1070 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 LAMC2Q13753 1193 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 KIAA0753Q2KHM9 967 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 QRICH1Q2TAL8 776 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 FBXO11Q86XK2 927 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 FAM184AQ8NB25 1140 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
SF3A3-203ENST00000461869 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 SENP2Q9HC62 589 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
SF3A3-203ENST00000461869 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 MRVI1Q9Y6F6 885 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 TRIP12Q14669 1992 aaPredicted RBP17.78■□□□□ 0.44
SF3A3-203ENST00000461869 REV3LO60673 3130 aa17.78■□□□□ 0.44
SF3A3-203ENST00000461869 LINC01553A4QN01 128 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 F2P00734 622 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 NR3C2P08235 984 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 ZNF286BP0CG31 522 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 KIF5BP33176 963 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 ERVK-21P61565 698 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 ZNF618Q5T7W0 954 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 FAM117BQ6P1L5 589 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
SF3A3-203ENST00000461869 CTCFLQ8NI51 663 aaPredicted RBP17.77■□□□□ 0.44
SF3A3-203ENST00000461869 KHSRPQ92945 711 aaKnown RBP eCLIP17.77■□□□□ 0.44
SF3A3-203ENST00000461869 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
SF3A3-203ENST00000461869 ARIH1Q9Y4X5 557 aaPredicted RBP17.77■□□□□ 0.44
SF3A3-203ENST00000461869 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.43
SF3A3-203ENST00000461869 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
SF3A3-203ENST00000461869 HAS3O00219 553 aa17.76■□□□□ 0.43
SF3A3-203ENST00000461869 CFBP00751 764 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms