RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SDF4Q9BRK5 362 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 BACH2Q9BYV9 841 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 KCNJ14Q9UNX9 436 aa12.06□□□□□ -0.48
TRAPPC12-213ENST00000461577 TRIM43BA6NCK2 446 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 KIAA0355O15063 1070 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 JAK2O60674 1132 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 ATP9AO75110 1047 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 CD4P01730 458 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 ARP10275 920 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 RAG1P15918 1043 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 PTPN11Q06124 597 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 TRIM29Q14134 588 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 MFSD10Q14728 455 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 NIPA1Q7RTP0 329 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 PLA2G4DQ86XP0 818 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 CYP2W1Q8TAV3 490 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 TRIM43Q96BQ3 446 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 GPR20Q99678 358 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 PHF20Q9BVI0 1012 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 AGO4Q9HCK5 861 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC12-213ENST00000461577 LTBP2Q14767 1821 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 MEIS1O00470 390 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 B4GALT4O60513 344 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 F2P00734 622 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 LGALS2P05162 132 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 SUPT20HL2P0C7V6 817 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 USP11P51784 963 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 FOSBP53539 338 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 SETQ01105 290 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 ST3GAL1Q11201 340 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 UTP14CQ5TAP6 766 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 KRT25Q7Z3Z0 450 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 TBCKQ8TEA7 893 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 KAT2BQ92831 832 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 BADQ92934 168 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 GDF15Q99988 308 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 UBE2OQ9C0C9 1292 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 BRMS1Q9HCU9 246 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 PCDH10Q9P2E7 1040 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 NOD1Q9Y239 953 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 NFASCO94856 1347 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 DNAH12Q6ZR08 3092 aa12.04□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAM86B1E9PN63 330 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 M0R2N6 131 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 TIMP1P01033 207 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAM86B2P0C5J1 330 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 CIITAP33076 1130 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 BMP8BP34820 402 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 KRT2P35908 639 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 MCM2P49736 904 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 HMGN5P82970 282 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 PRR16Q569H4 304 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 C7orf31Q8N865 590 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 FAM184AQ8NB25 1140 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 CRYGNQ8WXF5 182 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 SEPT1Q8WYJ6 367 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 JPH1Q9HDC5 661 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 GJB4Q9NTQ9 266 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 TRMT13Q9NUP7 481 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 SLC9A2Q9UBY0 812 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 ZNF215Q9UL58 517 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-213ENST00000461577 IGLV3-22A0A075B6J6 115 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 H3BRB1 525 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 HAS3O00219 553 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 NPY5RQ15761 445 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 SESTD1Q86VW0 696 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 UIMC1Q96RL1 719 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 ZNF577Q9BSK1 485 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 C16orf70Q9BSU1 422 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 HIPK3Q9H422 1215 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 TELO2Q9Y4R8 837 aa12.02□□□□□ -0.49
TRAPPC12-213ENST00000461577 KAT6AQ92794 2004 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 GSTTP1A0A1W2PQM5 241 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 CYP2C9P11712 490 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 ITGB8P26012 769 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 CYP2C18P33260 490 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 FPGSQ05932 587 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 ITGB3BPQ13352 177 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 SAFBQ15424 915 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 PTGISQ16647 500 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 INF2Q27J81 1249 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms