RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 DEXIO95424 95 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 FDPSP14324 419 aaKnown RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 UBA1P22314 1058 aaKnown RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 AKAP17AQ02040 695 aaKnown RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 MYO9BQ13459 2157 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 HIC1Q14526 733 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 HSDL1Q3SXM5 330 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 BRDTQ58F21 947 aaPredicted RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 MYSM1Q5VVJ2 828 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 HERVK_113Q902F9 699 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 DHX38Q92620 1227 aaKnown RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 RRP36Q96EU6 259 aaKnown RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 IPO9Q96P70 1041 aaKnown RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 SEZ6LQ9BYH1 1024 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 ORC3Q9UBD5 711 aaPredicted RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 SIP14410 1827 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 KPNA6O60684 536 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 GGPS1O95749 300 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 CCND2P30279 289 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 PSRC1Q6PGN9 363 aaPredicted RBP17.84■□□□□ 0.45
SDF4-204ENST00000459994 DEFB128Q7Z7B8 93 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 DHX37Q8IY37 1157 aaKnown RBP17.84■□□□□ 0.45
SDF4-204ENST00000459994 SAMD3Q8N6K7 520 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 WASF1Q92558 559 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 EMID1Q96A84 441 aaPredicted RBP17.84■□□□□ 0.45
SDF4-204ENST00000459994 ALG1Q9BT22 464 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 RTEL1Q9NZ71 1219 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
SDF4-204ENST00000459994 KAT6AQ92794 2004 aa17.83■□□□□ 0.45
SDF4-204ENST00000459994 UNC80Q8N2C7 3258 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 FGBP02675 491 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 PSEN2P49810 448 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 ZNF200P98182 395 aaPredicted RBP17.83■□□□□ 0.44
SDF4-204ENST00000459994 GRIN2CQ14957 1233 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 PKN1Q16512 942 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 UBE2SQ16763 222 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 PFKFB3Q16875 520 aaPredicted RBP17.83■□□□□ 0.44
SDF4-204ENST00000459994 CELF3Q5SZQ8 465 aaKnown RBP17.83■□□□□ 0.44
SDF4-204ENST00000459994 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 PPTC7Q8NI37 304 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 WNT8BQ93098 351 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 HDAC6Q9UBN7 1215 aa17.83■□□□□ 0.44
SDF4-204ENST00000459994 SEC63Q9UGP8 760 aaKnown RBP17.83■□□□□ 0.44
SDF4-204ENST00000459994 hCG_1984214I3L0E3 225 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 HAS3O00219 553 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 SUPT20HL2P0C7V6 817 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 HOXD8P13378 290 aaPredicted RBP17.82■□□□□ 0.44
SDF4-204ENST00000459994 SCG2P13521 617 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 GJB2P29033 226 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 RABGGTBP53611 331 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 TRAF1Q13077 416 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 GPNMBQ14956 572 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 PTGISQ16647 500 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 DGKDQ16760 1214 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 FAM177A1Q8N128 213 aaPredicted RBP17.82■□□□□ 0.44
SDF4-204ENST00000459994 ZNF713Q8N859 430 aaPredicted RBP17.82■□□□□ 0.44
SDF4-204ENST00000459994 YBX2Q9Y2T7 364 aaKnown RBP17.82■□□□□ 0.44
SDF4-204ENST00000459994 CHD9Q3L8U1 2897 aa17.82■□□□□ 0.44
SDF4-204ENST00000459994 PPFIA3O75145 1194 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 F2P00734 622 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 IQCF3P0C7M6 154 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 MYOGP15173 224 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 PTPN11Q06124 597 aaPredicted RBP17.81■□□□□ 0.44
SDF4-204ENST00000459994 LAMC2Q13753 1193 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 MFSD10Q14728 455 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 TCTN1Q2MV58 587 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 TYW1BQ6NUM6 668 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 SESTD1Q86VW0 696 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 TIFAQ96CG3 184 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 SPATA33Q96N06 139 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 INPP4AQ96PE3 977 aaPredicted RBP17.81■□□□□ 0.44
SDF4-204ENST00000459994 FOXD4L1Q9NU39 408 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 GTF2IRD1Q9UHL9 959 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 MICAL3Q7RTP6 2002 aa17.81■□□□□ 0.44
SDF4-204ENST00000459994 PRUNE2Q8WUY3 3088 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 DTNBO60941 627 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 KIAA0753Q2KHM9 967 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 C16orf70Q9BSU1 422 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 NKX2-4Q9H2Z4 354 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 ZNF576Q9H609 170 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 SH3GLB2Q9NR46 395 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 LOXHD1Q8IVV2 1947 aa17.8■□□□□ 0.44
SDF4-204ENST00000459994 WDR81Q562E7 1941 aa17.79■□□□□ 0.44
SDF4-204ENST00000459994 PIK3CDO00329 1044 aa17.79■□□□□ 0.44
SDF4-204ENST00000459994 PDCP20941 246 aa17.79■□□□□ 0.44
SDF4-204ENST00000459994 ICAM3P32942 547 aa17.79■□□□□ 0.44
SDF4-204ENST00000459994 WWC2Q6AWC2 1192 aa17.79■□□□□ 0.44
SDF4-204ENST00000459994 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
SDF4-204ENST00000459994 CHD7Q9P2D1 2997 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 ZBBXA8MT70 800 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 SPATA31C2B4DYI2 1134 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 PDIA4P13667 645 aaKnown RBP17.78■□□□□ 0.44
SDF4-204ENST00000459994 TRIM71Q2Q1W2 868 aaKnown RBP17.78■□□□□ 0.44
SDF4-204ENST00000459994 PCNX4Q63HM2 1172 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 KCNV1Q6PIU1 500 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms