RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 NCAPH2Q6IBW4 605 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 EMBQ6PCB8 327 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 GBP6Q6ZN66 633 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 RRAGAQ7L523 313 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 DYMQ7RTS9 669 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 FRMD5Q7Z6J6 570 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 TRIM59Q8IWR1 403 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 EIF1ADQ8N9N8 165 aaKnown RBP9.76□□□□□ -0.85
HDAC3-202ENST00000459727 LRRC15Q8TF66 581 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 COG1Q8WTW3 980 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 BAP1Q92560 729 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 COA7Q96BR5 231 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 DNAJC19Q96DA6 116 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
HDAC3-202ENST00000459727 IDI2Q9BXS1 227 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 ANO3Q9BYT9 981 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 FAM107BQ9H098 131 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 PDE11AQ9HCR9 933 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 PLCB1Q9NQ66 1216 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 FAM207AQ9NSI2 230 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-202ENST00000459727 FBXL5Q9UKA1 691 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 ADAM21Q9UKJ8 722 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 RABGAP1Q9Y3P9 1069 aa9.76□□□□□ -0.85
HDAC3-202ENST00000459727 A0A0U1RQJ8 604 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 MACROD2A1Z1Q3 448 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 GTPBP10A4D1E9 387 aaKnown RBP9.75□□□□□ -0.85
HDAC3-202ENST00000459727 LRRC53A6NM62 1247 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 TULP1O00294 542 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-202ENST00000459727 OPA1O60313 960 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 CCDC172P0C7W6 258 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 RPA1P27694 616 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 ACTN2P35609 894 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 SREBF1P36956 1147 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-202ENST00000459727 MMP14P50281 582 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 EPHB4P54760 987 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 CLUL1Q15846 466 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 CDC37Q16543 378 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-202ENST00000459727 BMT2Q1RMZ1 405 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 TDRD12Q587J7 1177 aaKnown RBP9.75□□□□□ -0.85
HDAC3-202ENST00000459727 STRIP1Q5VSL9 837 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 ALS2CLQ60I27 953 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 PTF1AQ7RTS3 328 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 AMIGO3Q86WK7 504 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 GPBP1Q86WP2 473 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 NOA1Q8NC60 698 aaKnown RBP9.75□□□□□ -0.85
HDAC3-202ENST00000459727 ATRIPQ8WXE1 791 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 HAS1Q92839 578 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 VTI1AQ96AJ9 217 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 LACRTQ9GZZ8 138 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 EPC1Q9H2F5 836 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 AIPL1Q9NZN9 384 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 KCND2Q9NZV8 630 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 ARHGAP20Q9P2F6 1191 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 SEL1LQ9UBV2 794 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 DNM3Q9UQ16 869 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 TRAF3IP3Q9Y228 551 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 PCDHA1Q9Y5I3 950 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 NRXN2Q9P2S2 1712 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 ATRNL1Q5VV63 1379 aa9.75□□□□□ -0.85
HDAC3-202ENST00000459727 MYH8P13535 1937 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 GOLGA8KD6RF30 607 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 PDXKO00764 312 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 EIF3DO15371 548 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 TBCAO75347 108 aaKnown RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ENTPD3O75355 529 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CYP11B2P19099 503 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CIITAP33076 1130 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CRKP46108 304 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ICA1Q05084 483 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 DDR1Q08345 913 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 PPFIA1Q13136 1202 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ASIC2Q16515 512 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 SLC18A3Q16572 532 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 NFIL3Q16649 462 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 QRICH1Q2TAL8 776 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 ASTE1Q2TB18 679 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CERKLQ49MI3 558 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 HERC4Q5GLZ8 1057 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 FAM83BQ5T0W9 1011 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 SLFN13Q68D06 897 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CDC42EP5Q6NZY7 148 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CCNI2Q6ZMN8 369 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 SMIM5Q71RC9 77 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 IFT20Q8IY31 132 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 SEPT12Q8IYM1 358 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 SYT2Q8N9I0 419 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 AFAP1L1Q8TED9 768 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 LMBR1Q8WVP7 490 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 MASTLQ96GX5 879 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 GPR101Q96P66 508 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 OSBPL9Q96SU4 736 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 RUFY1Q96T51 708 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 MMS19Q96T76 1030 aa9.74□□□□□ -0.85
HDAC3-202ENST00000459727 POLR3CQ9BUI4 534 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-202ENST00000459727 CPVLQ9H3G5 476 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms