RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 AOPEPQ8N6M6 819 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 GPRASP2Q96D09 838 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 IWS1Q96ST2 819 aa27.36■■□□□ 1.97
U2AF1-204ENST00000459639 CCDC173Q0VFZ6 552 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 MCM6Q14566 821 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 CATSPER3Q86XQ3 398 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 SHCBP1Q8NEM2 672 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 MROH8Q9H579 483 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 KIAA1024Q9UPX6 916 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 LRRC37A2A6NM11 1700 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 LOXHD1Q8IVV2 1947 aa27.35■■□□□ 1.97
U2AF1-204ENST00000459639 PASKQ96RG2 1323 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 EML1O00423 815 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 IKBKBO14920 756 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 SPATA31C1P0DKV0 1188 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 CYP2C8P10632 490 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 ERVK-9P63128 1117 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 ERVK-24P63145 666 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 NLRX1Q86UT6 975 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 SMCR8Q8TEV9 937 aaPredicted RBP27.34■■□□□ 1.97
U2AF1-204ENST00000459639 INPP4AQ96PE3 977 aaPredicted RBP27.34■■□□□ 1.97
U2AF1-204ENST00000459639 EIF2AK1Q9BQI3 630 aaKnown RBP27.34■■□□□ 1.97
U2AF1-204ENST00000459639 TUFT1Q9NNX1 390 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 TBC1D22BQ9NU19 505 aa27.34■■□□□ 1.97
U2AF1-204ENST00000459639 TESPA1A2RU30 521 aaPredicted RBP27.33■■□□□ 1.97
U2AF1-204ENST00000459639 SMTNL1A8MU46 457 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 MAFGO15525 162 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 Q3C1V9 767 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 CNNM4Q6P4Q7 775 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 UNC45AQ9H3U1 944 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 DHX15O43143 795 aaKnown RBP27.33■■□□□ 1.97
U2AF1-204ENST00000459639 KLRC4O43908 158 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 MUTP22033 750 aa27.33■■□□□ 1.97
U2AF1-204ENST00000459639 GCLCP48506 637 aaPredicted RBP27.33■■□□□ 1.97
U2AF1-204ENST00000459639 CCDC47Q96A33 483 aaKnown RBP27.33■■□□□ 1.97
U2AF1-204ENST00000459639 ADD3Q9UEY8 706 aaKnown RBP27.33■■□□□ 1.97
U2AF1-204ENST00000459639 ZNFX1Q9P2E3 1918 aaKnown RBP27.32■■□□□ 1.96
U2AF1-204ENST00000459639 POTEFA5A3E0 1075 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 POTEB2H3BUK9 544 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 CHMP2AO43633 222 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 ALDH5A1P51649 535 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-204ENST00000459639 ITGB3BPQ13352 177 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-204ENST00000459639 ZNF658Q5TYW1 1059 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-204ENST00000459639 POTEGQ6S5H5 508 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 RASAL3Q86YV0 1011 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 NEK9Q8TD19 979 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 PPP1R9BQ96SB3 815 aa27.32■■□□□ 1.96
U2AF1-204ENST00000459639 RHOBTB3O94955 611 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 ASIC1P78348 528 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 CNTN2Q02246 1040 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 DHX8Q14562 1220 aaKnown RBP27.31■■□□□ 1.96
U2AF1-204ENST00000459639 EPHA7Q15375 998 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 FAM43AQ8N2R8 423 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 FAM133AQ8N9E0 248 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 CDHR1Q96JP9 859 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 PARK7Q99497 189 aaKnown RBP27.31■■□□□ 1.96
U2AF1-204ENST00000459639 HSD17B14Q9BPX1 270 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 GTPBP4Q9BZE4 634 aaKnown RBP27.31■■□□□ 1.96
U2AF1-204ENST00000459639 PLXNB2O15031 1838 aa27.31■■□□□ 1.96
U2AF1-204ENST00000459639 E9PMD0 336 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 ERCC5P28715 1186 aaPredicted RBP27.3■■□□□ 1.96
U2AF1-204ENST00000459639 CCNA1P78396 465 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 MYL5Q02045 173 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 KMT5BQ4FZB7 885 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 GPRC5AQ8NFJ5 357 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 PDLIM2Q96JY6 352 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 GPBP1L1Q9HC44 474 aaPredicted RBP27.3■■□□□ 1.96
U2AF1-204ENST00000459639 ASTN1O14525 1302 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 MYMKA6NI61 221 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 PLA2G4BP0C869 781 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 TPM4P67936 248 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 STXBP2Q15833 593 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 GNPTABQ3T906 1256 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 SAPCD2Q86UD0 394 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 PKD2L1Q9P0L9 805 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 MORF4L1Q9UBU8 362 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 DNM3Q9UQ16 869 aa27.3■■□□□ 1.96
U2AF1-204ENST00000459639 PVALEFA0A1B0GWK0 134 aa27.29■■□□□ 1.96
U2AF1-204ENST00000459639 ZNF157P51786 506 aaPredicted RBP27.29■■□□□ 1.96
U2AF1-204ENST00000459639 CYP4A11Q02928 519 aa27.29■■□□□ 1.96
U2AF1-204ENST00000459639 KCTD2Q14681 263 aa27.29■■□□□ 1.96
U2AF1-204ENST00000459639 NCAPHQ15003 741 aa27.29■■□□□ 1.96
U2AF1-204ENST00000459639 MMP19Q99542 508 aa27.29■■□□□ 1.96
U2AF1-204ENST00000459639 DDX39AO00148 427 aaKnown RBP27.28■■□□□ 1.96
U2AF1-204ENST00000459639 RGS20O76081 388 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 EDNRBP24530 442 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 DYDC2Q96IM9 177 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 PTPN18Q99952 460 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 R3HDMLQ9H3Y0 253 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 EXOC1Q9NV70 894 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 RGL1Q9NZL6 768 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 TCEAL9Q9UHQ7 104 aa27.28■■□□□ 1.96
U2AF1-204ENST00000459639 SOWAHBA6NEL2 793 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 B4DLN1 442 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 EIF3JO75822 258 aaKnown RBP27.27■■□□□ 1.96
U2AF1-204ENST00000459639 RGMBQ6NW40 437 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 SARM1Q6SZW1 724 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 UNC13DQ70J99 1090 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 MIER3Q7Z3K6 550 aa27.27■■□□□ 1.96
U2AF1-204ENST00000459639 DNAJC25-GNG10A0A024R161 153 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms