RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 POTEEQ6S8J3 1075 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 LARGE2Q8N3Y3 721 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 CEP63Q96MT8 703 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 FGFBP2Q9BYJ0 223 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 NHEJ1Q9H9Q4 299 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-202ENST00000457422 PLAGL2Q9UPG8 496 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 TUBB4BP68371 445 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-202ENST00000457422 SPDYE2Q495Y8 402 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 FKBP1CQ5VVH2 108 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 CATSPER3Q86XQ3 398 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 TBC1D7Q9P0N9 293 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 COL4A3BPQ9Y5P4 624 aa18.5■□□□□ 0.55
CCDC43-202ENST00000457422 SMCHD1A6NHR9 2005 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 NCAPH2Q6IBW4 605 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 ZC3H3Q8IXZ2 948 aaKnown RBP18.49■□□□□ 0.55
CCDC43-202ENST00000457422 KCTD17Q8N5Z5 321 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 GOPCQ9HD26 462 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 TRIM10Q9UDY6 481 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 ZBTB21Q9ULJ3 1066 aa18.49■□□□□ 0.55
CCDC43-202ENST00000457422 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
CCDC43-202ENST00000457422 GNA14O95837 355 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 SPATA31C1P0DKV0 1188 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 MARSP56192 900 aaKnown RBP18.48■□□□□ 0.55
CCDC43-202ENST00000457422 CHMP4BP1P59074 171 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 AMPD2Q01433 879 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 ARSHQ5FYA8 562 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 TEX35Q5T0J7 233 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 FAM83BQ5T0W9 1011 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 ARHGAP27Q6ZUM4 889 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 EDEM3Q9BZQ6 932 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 MSH4O15457 936 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 TBC1D12O60347 775 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 ZRANB2O95218 330 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCDC43-202ENST00000457422 BMS1Q14692 1282 aaKnown RBP18.48■□□□□ 0.55
CCDC43-202ENST00000457422 WHAMMP3Q1A5X7 153 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 OGFOD1Q8N543 542 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 SYT2Q8N9I0 419 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-202ENST00000457422 MTMR14Q8NCE2 650 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 EHBP1Q8NDI1 1231 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 KCTD10Q9H3F6 313 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 VEZTQ9HBM0 779 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 VAV3Q9UKW4 847 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 GUCA1BQ9UMX6 200 aa18.48■□□□□ 0.55
CCDC43-202ENST00000457422 KRT86O43790 486 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 PLA2G6O60733 806 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 IPO7O95373 1038 aaKnown RBP18.47■□□□□ 0.55
CCDC43-202ENST00000457422 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 HERC4Q5GLZ8 1057 aaPredicted RBP18.47■□□□□ 0.55
CCDC43-202ENST00000457422 TMCO3Q6UWJ1 677 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 CDAN1Q8IWY9 1227 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 KRT222Q8N1A0 295 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 SCFD1Q8WVM8 642 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 EPC1Q9H2F5 836 aa18.47■□□□□ 0.55
CCDC43-202ENST00000457422 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
CCDC43-202ENST00000457422 TRAF5O00463 557 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 EPHB6O15197 1021 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 DPEP1P16444 411 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 CCDC122Q5T0U0 273 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 POLR3CQ9BUI4 534 aaPredicted RBP18.46■□□□□ 0.55
CCDC43-202ENST00000457422 RANBP17Q9H2T7 1088 aaKnown RBP18.46■□□□□ 0.55
CCDC43-202ENST00000457422 DNM3Q9UQ16 869 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 IGLV3-22A0A075B6J6 115 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 MEIS1O00470 390 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 KRT18P05783 430 aaKnown RBP18.46■□□□□ 0.55
CCDC43-202ENST00000457422 ZSCAN20P17040 1043 aaPredicted RBP18.46■□□□□ 0.55
CCDC43-202ENST00000457422 ERCC3P19447 782 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 GIT2Q14161 759 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 EDRF1Q3B7T1 1238 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 FAM83AQ86UY5 434 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 NELFCDQ8IXH7 590 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 CYP2W1Q8TAV3 490 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 JAKMIP2Q96AA8 810 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 PURBQ96QR8 312 aaKnown RBP18.46■□□□□ 0.55
CCDC43-202ENST00000457422 FAM207AQ9NSI2 230 aaPredicted RBP18.46■□□□□ 0.55
CCDC43-202ENST00000457422 EMILIN3Q9NT22 766 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 TFR2Q9UP52 801 aa18.46■□□□□ 0.55
CCDC43-202ENST00000457422 ATP8B1O43520 1251 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 KCNA3P22001 575 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 PSMC6P62333 389 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 CHURC1Q8WUH1 139 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 BAP1Q92560 729 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 TMEM39BQ9GZU3 492 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 VCPKMTQ9H867 229 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 MMRN2Q9H8L6 949 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 FHOD1Q9Y613 1164 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 RBBP6Q7Z6E9 1792 aaKnown RBP18.45■□□□□ 0.54
CCDC43-202ENST00000457422 LCA5LO95447 670 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 ZNF76P36508 570 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 VAV2P52735 878 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 PABPC4Q13310 644 aaKnown RBP eCLIP18.45■□□□□ 0.542e-8■■■■□ 19.9
CCDC43-202ENST00000457422 CCDC40Q4G0X9 1142 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 POTEAQ6S8J7 498 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 TRAPPC11Q7Z392 1133 aa18.45■□□□□ 0.54
CCDC43-202ENST00000457422 TRIM59Q8IWR1 403 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms