RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HSDL1Q3SXM5 330 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 SPATA33Q96N06 139 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.82■□□□□ 0.762e-19■■□□□ 13.5
USP39-208ENST00000455732 WNT8AQ9H1J5 351 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 A0A0C4DFX4 3053 aa19.82■□□□□ 0.76
USP39-208ENST00000455732 MAFGO15525 162 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 PPFIA4O75335 1185 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 F2P00734 622 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 CYP2C9P11712 490 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 FAM47CQ5HY64 1035 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 TMEM240Q5SV17 173 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 SESTD1Q86VW0 696 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 REXO1Q8N1G1 1221 aaKnown RBP19.81■□□□□ 0.76
USP39-208ENST00000455732 GIMAP8Q8ND71 665 aaPredicted RBP19.81■□□□□ 0.76
USP39-208ENST00000455732 CRYGNQ8WXF5 182 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 PGBD1Q96JS3 809 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 RNPC3Q96LT9 517 aaKnown RBP19.81■□□□□ 0.76
USP39-208ENST00000455732 KIF2CQ99661 725 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 BCAS3Q9H6U6 928 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 MLXIPQ9HAP2 919 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 JADE2Q9NQC1 790 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 TMEM260Q9NX78 707 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 VPS54Q9P1Q0 977 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 TET1Q8NFU7 2136 aa19.81■□□□□ 0.76
USP39-208ENST00000455732 HAS3O00219 553 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 MTMR1Q13613 665 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 ME3Q16798 604 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 GTF3C6Q969F1 213 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 KATNAL1Q9BW62 490 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 C22orf23Q9BZE7 217 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 STXBP5LQ9Y2K9 1186 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 KAT6AQ92794 2004 aa19.8■□□□□ 0.76
USP39-208ENST00000455732 SORBS3O60504 671 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 ZNF286BP0CG31 522 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 ACRP10323 421 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 KCNA2P16389 499 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 CCL23P55773 120 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 SMAD3P84022 425 aaKnown RBP19.79■□□□□ 0.76
USP39-208ENST00000455732 ARHGAP4P98171 946 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 CEP55Q53EZ4 464 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 RASIP1Q5U651 963 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 JAKMIP3Q5VZ66 844 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 FAM109BQ6ICB4 259 aaPredicted RBP19.79■□□□□ 0.76
USP39-208ENST00000455732 VWCEQ96DN2 955 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 CTAGE1Q96RT6 745 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 MXRA8Q9BRK3 442 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 IL23AQ9NPF7 189 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 GBF1Q92538 1859 aa19.79■□□□□ 0.76
USP39-208ENST00000455732 ADAMTS3O15072 1205 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 LARGE1O95461 756 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 CTDNEP1O95476 244 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 CYP3A4P08684 503 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 PSEN2P49810 448 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 GALNT17Q6IS24 598 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 PSRC1Q6PGN9 363 aaPredicted RBP19.78■□□□□ 0.76
USP39-208ENST00000455732 ZNF365Q70YC5 407 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 CYFIP1Q7L576 1253 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 NIPA1Q7RTP0 329 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 MTMR10Q9NXD2 777 aa19.78■□□□□ 0.76
USP39-208ENST00000455732 MEIS1O00470 390 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 NOP56O00567 594 aaKnown RBP19.77■□□□□ 0.76
USP39-208ENST00000455732 ATP9AO75110 1047 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 CHMP4BP1P59074 171 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 MFSD10Q14728 455 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 GDF6Q6KF10 455 aaPredicted RBP19.77■□□□□ 0.76
USP39-208ENST00000455732 GPR20Q99678 358 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 C16orf70Q9BSU1 422 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 KCNH7Q9NS40 1196 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 HDAC6Q9UBN7 1215 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 GTF2IRD1Q9UHL9 959 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 PCDHA4Q9UN74 947 aa19.77■□□□□ 0.76
USP39-208ENST00000455732 PITPNM1O00562 1244 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 NLRP5P59047 1200 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 NPY5RQ15761 445 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 PTGISQ16647 500 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 KIAA0753Q2KHM9 967 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 CYP2W1Q8TAV3 490 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 SCLYQ96I15 445 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 AIFM3Q96NN9 605 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 UPF2Q9HAU5 1272 aaKnown RBP19.76■□□□□ 0.75
USP39-208ENST00000455732 MYO9BQ13459 2157 aa19.76■□□□□ 0.75
USP39-208ENST00000455732 M0R2N6 131 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 LGALS2P05162 132 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 NECAB1Q8N987 351 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 IL27Q8NEV9 243 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 RASGRP4Q8TDF6 673 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 HERVK_113Q902F9 699 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 ALG1Q9BT22 464 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 LIMCH1Q9UPQ0 1083 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 TELO2Q9Y4R8 837 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 NFASCO94856 1347 aa19.75■□□□□ 0.75
USP39-208ENST00000455732 UNC80Q8N2C7 3258 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 IGLV3-22A0A075B6J6 115 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.74■□□□□ 0.75
USP39-208ENST00000455732 FAM86B1E9PN63 330 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 DLL1O00548 723 aa19.74■□□□□ 0.75
USP39-208ENST00000455732 FAM86B2P0C5J1 330 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms