RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 APBB2Q92870 758 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 COPS5Q92905 334 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 NECTIN4Q96NY8 510 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 KATNAL1Q9BW62 490 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 DBNLQ9UJU6 430 aaKnown RBP11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 FBXL21Q9UKT6 434 aa11.32□□□□□ -0.6
NIPSNAP1-204ENST00000455496 HOXB8P17481 243 aaPredicted RBP11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 RFX1P22670 979 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 TECP42680 631 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ANKRD45Q5TZF3 282 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ANKRD54Q6NXT1 300 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 TMEM184AQ6ZMB5 413 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 SDR42E1Q8WUS8 393 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 KAT2BQ92831 832 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 WNT8BQ93098 351 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 MPHOSPH6Q99547 160 aaKnown RBP11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 CCDC8Q9H0W5 538 aaPredicted RBP11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 GCN1Q92616 2671 aaKnown RBP11.31□□□□□ -0.6
NIPSNAP1-204ENST00000455496 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 MMP3P08254 477 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ARP10275 920 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 RBM10P98175 930 aaKnown RBP11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 DUSP6Q16828 381 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 DHX37Q8IY37 1157 aaKnown RBP11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ZDHHC14Q8IZN3 488 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 SIX5Q8N196 739 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 VN1R2Q8NFZ6 395 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 APOL5Q9BWW9 433 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ERVK-5Q9HDB9 667 aa11.3□□□□□ -0.6
NIPSNAP1-204ENST00000455496 PSEN2P49810 448 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 SHC2P98077 582 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 PDE4DQ08499 809 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 TBC1D8BQ0IIM8 1120 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 DGKDQ16760 1214 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 SYCE2Q6PIF2 218 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 LRSAM1Q6UWE0 723 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ZNF689Q96CS4 500 aaPredicted RBP11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 RC3H2Q9HBD1 1191 aaKnown RBP11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
NIPSNAP1-204ENST00000455496 SLC30A4O14863 429 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 SPTLC1O15269 473 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 ZIC2O95409 532 aaPredicted RBP11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 BMP3P12645 472 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 STAT2P52630 851 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 NUCB1Q02818 461 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 TPRNQ4KMQ1 711 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 CENPQQ7L2Z9 268 aaPredicted RBP11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 C1orf210Q8IVY1 113 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 DDX1Q92499 740 aaKnown RBP11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 GPATCH3Q96I76 525 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 LNPKQ9C0E8 428 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 PPP4R2Q9NY27 417 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 CLIP2Q9UDT6 1046 aa11.28□□□□□ -0.6
NIPSNAP1-204ENST00000455496 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.6
NIPSNAP1-204ENST00000455496 B4DLN1 442 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 TMEM232C9JQI7 657 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 CAND2O75155 1236 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 GH1P01241 217 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 PMLP29590 882 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 MRPL12P52815 198 aaKnown RBP11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 UBE3AQ05086 875 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 ITIH3Q06033 890 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 IKQ13123 557 aaPredicted RBP11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 MFSD10Q14728 455 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 KIAA0753Q2KHM9 967 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 C12orf60Q5U649 245 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 PDE12Q6L8Q7 609 aaKnown RBP11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 SERINC5Q86VE9 423 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 CHD1LQ86WJ1 897 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 ATP8A2Q9NTI2 1148 aa11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 ISY1Q9ULR0 285 aaKnown RBP11.27□□□□□ -0.61
NIPSNAP1-204ENST00000455496 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
NIPSNAP1-204ENST00000455496 DGKIO75912 1065 aa11.26□□□□□ -0.61
NIPSNAP1-204ENST00000455496 KCNA4P22459 653 aa11.26□□□□□ -0.61
NIPSNAP1-204ENST00000455496 MTHFRP42898 656 aa11.26□□□□□ -0.61
NIPSNAP1-204ENST00000455496 TDGQ13569 410 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms