RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 COL20A1Q9P218 1284 aa18.26■□□□□ 0.51
NELFE-207ENST00000454913 ZNF543Q08ER8 600 aa18.25■□□□□ 0.51
NELFE-207ENST00000454913 BTG3Q14201 252 aaPredicted RBP18.25■□□□□ 0.51
NELFE-207ENST00000454913 CBX2Q14781 532 aaPredicted RBP18.25■□□□□ 0.51
NELFE-207ENST00000454913 ASIC4Q96FT7 647 aa18.25■□□□□ 0.51
NELFE-207ENST00000454913 TRPC6Q9Y210 931 aa18.25■□□□□ 0.51
NELFE-207ENST00000454913 USP15Q9Y4E8 981 aaPredicted RBP18.25■□□□□ 0.51
NELFE-207ENST00000454913 PRR23AA6NEV1 266 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 PROB1E7EW31 1015 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 TREHO43280 583 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 EIF3JO75822 258 aaKnown RBP18.24■□□□□ 0.51
NELFE-207ENST00000454913 ID4P47928 161 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 HSDL1Q3SXM5 330 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 ZBTB33Q86T24 672 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 PHF7Q9BWX1 381 aaPredicted RBP18.24■□□□□ 0.51
NELFE-207ENST00000454913 ZBTB40Q9NUA8 1239 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 CLEC1BQ9P126 229 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
NELFE-207ENST00000454913 ABCB11O95342 1321 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 CAND2O75155 1236 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 LINC00271P0C7V0 271 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 MS4A1P11836 297 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 COASYQ13057 564 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 RBM23Q86U06 439 aaKnown RBP18.23■□□□□ 0.51
NELFE-207ENST00000454913 MCF2L2Q86YR7 1114 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 EFHBQ8N7U6 833 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 CLP1Q92989 425 aaKnown RBP18.23■□□□□ 0.51
NELFE-207ENST00000454913 BARX2Q9UMQ3 279 aaPredicted RBP18.23■□□□□ 0.51
NELFE-207ENST00000454913 KIAA1671Q9BY89 1806 aa18.23■□□□□ 0.51
NELFE-207ENST00000454913 RIF1Q5UIP0 2472 aaKnown RBP18.22■□□□□ 0.51
NELFE-207ENST00000454913 FAM186AA6NE01 2351 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 ORC4O43929 436 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 GGPS1O95749 300 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 NR3C2P08235 984 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 GOLGA8HP0CJ92 632 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 SMIM10L2AP0DMW4 78 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 SMIM10L2BP0DMW5 78 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 HOXD8P13378 290 aaPredicted RBP18.22■□□□□ 0.51
NELFE-207ENST00000454913 ICAM3P32942 547 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 NRIP1P48552 1158 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 MYSM1Q5VVJ2 828 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 C16orf70Q9BSU1 422 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 PLVAPQ9BX97 442 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 CPVLQ9H3G5 476 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 PLAGL2Q9UPG8 496 aa18.22■□□□□ 0.51
NELFE-207ENST00000454913 H3BRB1 525 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 GALR2O43603 387 aaPredicted RBP18.21■□□□□ 0.51
NELFE-207ENST00000454913 NUBP1P53384 320 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 CAMK1Q14012 370 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 CDC37Q16543 378 aaPredicted RBP18.21■□□□□ 0.51
NELFE-207ENST00000454913 PTPN21Q16825 1174 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 CELF3Q5SZQ8 465 aaKnown RBP18.21■□□□□ 0.51
NELFE-207ENST00000454913 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 RNPEPQ9H4A4 650 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 TUT1Q9H6E5 874 aaKnown RBP18.21■□□□□ 0.51
NELFE-207ENST00000454913 PXMP2Q9NR77 195 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 ANAPC4Q9UJX5 808 aa18.21■□□□□ 0.51
NELFE-207ENST00000454913 PDGFBP01127 241 aaPredicted RBP18.2■□□□□ 0.5
NELFE-207ENST00000454913 GNAT1P11488 350 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 MYCLP12524 364 aaPredicted RBP18.2■□□□□ 0.5
NELFE-207ENST00000454913 DNAJB1P25685 340 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 ZMYM1Q5SVZ6 1142 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 GPATCH4Q5T3I0 446 aaKnown RBP18.2■□□□□ 0.5
NELFE-207ENST00000454913 KCNV1Q6PIU1 500 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 MAF1Q9H063 256 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 CCDC171Q6TFL3 1326 aa18.2■□□□□ 0.5
NELFE-207ENST00000454913 FOXP2O15409 715 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 CFBP00751 764 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 HSPD1P10809 573 aaKnown RBP18.19■□□□□ 0.5
NELFE-207ENST00000454913 GHRP10912 638 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 KAT6AQ92794 2004 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 P2RX5Q93086 422 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 RIPOR3Q96MK2 946 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 RC3H2Q9HBD1 1191 aaKnown RBP18.19■□□□□ 0.5
NELFE-207ENST00000454913 TCP11L1Q9NUJ3 509 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 SETD4Q9NVD3 440 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 DCHS1Q96JQ0 3298 aa18.19■□□□□ 0.5
NELFE-207ENST00000454913 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 DHX16O60231 1041 aaKnown RBP18.18■□□□□ 0.5
NELFE-207ENST00000454913 GLP2RO95838 553 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 LGALS2P05162 132 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 ITGB1P05556 798 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 HOXC8P31273 242 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 NBL1P41271 181 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 POF1BQ8WVV4 589 aa18.18■□□□□ 0.5
NELFE-207ENST00000454913 NKD2Q969F2 451 aaPredicted RBP18.18■□□□□ 0.5
NELFE-207ENST00000454913 ZNF689Q96CS4 500 aaPredicted RBP18.18■□□□□ 0.5
NELFE-207ENST00000454913 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
NELFE-207ENST00000454913 MRPL11Q9Y3B7 192 aaKnown RBP18.18■□□□□ 0.5
NELFE-207ENST00000454913 MRPL42Q9Y6G3 142 aaKnown RBP18.18■□□□□ 0.5
NELFE-207ENST00000454913 TTC3P53804 2025 aa18.17■□□□□ 0.5
NELFE-207ENST00000454913 NOP56O00567 594 aaKnown RBP18.17■□□□□ 0.5
NELFE-207ENST00000454913 UBA1P22314 1058 aaKnown RBP18.17■□□□□ 0.5
NELFE-207ENST00000454913 SP100P23497 879 aaPredicted RBP18.17■□□□□ 0.5
NELFE-207ENST00000454913 ARHGAP4P98171 946 aa18.17■□□□□ 0.5
NELFE-207ENST00000454913 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
NELFE-207ENST00000454913 KLHL23Q8NBE8 558 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms