RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 DUSP28Q4G0W2 176 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 SEPT14Q6ZU15 432 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 RDM1Q8NG50 284 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-206ENST00000454852 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 TTC12Q9H892 705 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-206ENST00000454852 PTPN22Q9Y2R2 807 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 Q9Y3F1 56 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 STK24Q9Y6E0 443 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 GOLGA6L22H0YM25 854 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 GAS7O60861 476 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 ARIH2O95376 493 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 CMA1P23946 247 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 CYP2C19P33261 490 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 MCM4P33991 863 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 ME1P48163 572 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 NKX3-2P78367 333 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 KRT76Q01546 638 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 SP2Q02086 613 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 ZNF746Q6NUN9 644 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-206ENST00000454852 METTL7BQ6UX53 244 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 EEPD1Q7L9B9 569 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 SMAP1Q8IYB5 467 aaPredicted RBP12.69□□□□□ -0.38
TRAF4-206ENST00000454852 KCTD17Q8N5Z5 321 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 SDF4Q9BRK5 362 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 TEKT3Q9BXF9 490 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 PDGFCQ9NRA1 345 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 LMBRD1Q9NUN5 540 aa12.69□□□□□ -0.38
TRAF4-206ENST00000454852 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 MARCH6O60337 910 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 FARP2O94887 1054 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 ATG7O95352 703 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 PTMSP20962 102 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 MUTP22033 750 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 SFNP31947 248 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 UBE2HP62256 183 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 GRIN1Q05586 938 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 CCDC144BQ3MJ40 725 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 CELF3Q5SZQ8 465 aaKnown RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 RESP18Q5W5W9 173 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 SHC4Q6S5L8 630 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 TRPV1Q8NER1 839 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 CCSER1Q9C0I3 900 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 CSRNP2Q9H175 543 aa12.68□□□□□ -0.38
TRAF4-206ENST00000454852 JPH1Q9HDC5 661 aaPredicted RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 GNEQ9Y223 722 aaKnown RBP12.68□□□□□ -0.38
TRAF4-206ENST00000454852 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 SEPT4O43236 478 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 CCNE2O96020 404 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 GH1P01241 217 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 HOXD8P13378 290 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-206ENST00000454852 AKR1A1P14550 325 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 SMPD1P17405 629 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 GRK4P32298 578 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 ADCYAP1R1P41586 468 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 TECP42680 631 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 JAK3P52333 1124 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 ARHGAP1Q07960 439 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-206ENST00000454852 LAMC2Q13753 1193 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 EPHA7Q15375 998 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 PKN2Q16513 984 aaKnown RBP12.67□□□□□ -0.38
TRAF4-206ENST00000454852 HYIQ5T013 277 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 GJA10Q969M2 543 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 CLIC6Q96NY7 704 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 HSD17B14Q9BPX1 270 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 UNC45AQ9H3U1 944 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 SLC9A2Q9UBY0 812 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 LRWD1Q9UFC0 647 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-206ENST00000454852 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 HPSEQ9Y251 543 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
TRAF4-206ENST00000454852 IGKV6D-21A0A0A0MT36 114 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 POTEMA6NI47 508 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 WDR64B1ANS9 1081 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 DUSP11O75319 330 aaKnown RBP12.66□□□□□ -0.38
TRAF4-206ENST00000454852 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
TRAF4-206ENST00000454852 GGPS1O95749 300 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
TRAF4-206ENST00000454852 ELNP15502 786 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 LBX1P52954 281 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 TNFAIP2Q03169 654 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 HAUS3Q68CZ6 603 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 ABHD15Q6UXT9 468 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
TRAF4-206ENST00000454852 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-206ENST00000454852 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 PCDHA10Q9Y5I2 948 aa12.66□□□□□ -0.38
TRAF4-206ENST00000454852 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms