RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PHLPP2Q6ZVD8 1323 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
VTA1-203ENST00000452973 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 TNIP1Q15025 636 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 BCAS3Q9H6U6 928 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 CCPG1Q9ULG6 757 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
VTA1-203ENST00000452973 ZNF569Q5MCW4 686 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 FKBP1CQ5VVH2 108 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 MNS1Q8NEH6 495 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 MBOAT7Q96N66 472 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 CARD6Q9BX69 1037 aa13.08□□□□□ -0.32
VTA1-203ENST00000452973 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
VTA1-203ENST00000452973 ZBTB39O15060 712 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 CCDC40Q4G0X9 1142 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 HYIQ5T013 277 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 LRCH2Q5VUJ6 765 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 MOXD1Q6UVY6 613 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 EIF2AK1Q9BQI3 630 aaKnown RBP13.07□□□□□ -0.32
VTA1-203ENST00000452973 NDST4Q9H3R1 872 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
VTA1-203ENST00000452973 A0A1W2PQC6 194 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 TBC1D12O60347 775 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 ALAS1P13196 640 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 MMP14P50281 582 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 PSMD2Q13200 908 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 MCTP2Q6DN12 878 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
VTA1-203ENST00000452973 RANBP17Q9H2T7 1088 aaKnown RBP13.07□□□□□ -0.32
VTA1-203ENST00000452973 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
VTA1-203ENST00000452973 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
VTA1-203ENST00000452973 ABCB11O95342 1321 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 KIF5CO60282 957 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 RPA1P27694 616 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 VWA3BQ502W6 1294 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 ANKRD7Q92527 254 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 HOOK2Q96ED9 719 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
VTA1-203ENST00000452973 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 TBX3O15119 743 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 TUBB4AP04350 444 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 CASP5P51878 434 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 EHHADHQ08426 723 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 SMCR8Q8TEV9 937 aaPredicted RBP13.06□□□□□ -0.32
VTA1-203ENST00000452973 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
VTA1-203ENST00000452973 TRIM10Q9UDY6 481 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 GUCA1BQ9UMX6 200 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 NFIBO00712 420 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 GAS7O60861 476 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 FLOT1O75955 427 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 ARP10275 920 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 NBPF12Q5TAG4 269 aaPredicted RBP13.06□□□□□ -0.32
VTA1-203ENST00000452973 WDR59Q6PJI9 974 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 ZBED3Q96IU2 234 aaPredicted RBP13.06□□□□□ -0.32
VTA1-203ENST00000452973 MAP7D2Q96T17 732 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 DEFB129Q9H1M3 183 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
VTA1-203ENST00000452973 PGAP2Q9UHJ9 254 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 VAV3Q9UKW4 847 aa13.06□□□□□ -0.32
VTA1-203ENST00000452973 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 EPHB6O15197 1021 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 NDUFA10O95299 355 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 FGFR1OPO95684 399 aaKnown RBP13.05□□□□□ -0.32
VTA1-203ENST00000452973 CIITAP33076 1130 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 TRAF1Q13077 416 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 MTMR2Q13614 643 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 SFR1Q86XK3 245 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 SCFD1Q8WVM8 642 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 DYDC2Q96IM9 177 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 CRACR2AQ9BSW2 395 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 SYNPO2Q9UMS6 1093 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 RABGAP1Q9Y3P9 1069 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
VTA1-203ENST00000452973 TNFAIP1Q13829 316 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 GIT2Q14161 759 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 CEP55Q53EZ4 464 aa13.05□□□□□ -0.32
VTA1-203ENST00000452973 TEPSINQ96N21 525 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms