RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 HERVK_113P62684 666 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 EHHADHQ08426 723 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 ZNF277Q9NRM2 450 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-202ENST00000451716 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
COL27A1-202ENST00000451716 CTAGE9A4FU28 777 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 OPLAHO14841 1288 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 USP11P51784 963 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 VWA3BQ502W6 1294 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 FKBP15Q5T1M5 1219 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 NCAPH2Q6IBW4 605 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 OTUD6BQ8N6M0 293 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 TBC1D5Q92609 795 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 RCCD1A6NED2 376 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 SPDYE3A6NKU9 549 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 FAM26FQ5R3K3 315 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 LRRC55Q6ZSA7 311 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 MYOCDQ8IZQ8 938 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
COL27A1-202ENST00000451716 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC189A1A4V9 331 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 PSMD14O00487 310 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 PPP1R2P41236 205 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
COL27A1-202ENST00000451716 KRT26Q7Z3Y9 468 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
COL27A1-202ENST00000451716 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
COL27A1-202ENST00000451716 TRAF5O00463 557 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 ENTPD3O75355 529 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 UBXN2AP68543 259 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 ZBED6P86452 979 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC122Q5T0U0 273 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CCDC174Q6PII3 467 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 RSRC2Q7L4I2 434 aaKnown RBP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 LENG9Q96B70 501 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 LACRTQ9GZZ8 138 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CXorf56Q9H5V9 222 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 HDAC6Q9UBN7 1215 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CYP11B2P19099 503 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CHMP4BP1P59074 171 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 SPIRE1Q08AE8 756 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 BIRC2Q13490 618 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 MEA1Q16626 185 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 CRYGNQ8WXF5 182 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 NAPGQ99747 312 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 PARD6BQ9BYG5 372 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 GLT8D2Q9H1C3 349 aa13.37□□□□□ -0.27
COL27A1-202ENST00000451716 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
COL27A1-202ENST00000451716 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 CYP3A7-CYP3A51PA0A087WV96 503 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 KIF1CO43896 1103 aaKnown RBP13.36□□□□□ -0.27
COL27A1-202ENST00000451716 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
COL27A1-202ENST00000451716 CYP3A7P24462 503 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 KIAA1328Q86T90 577 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 LARGE2Q8N3Y3 721 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 SIK3Q9Y2K2 1263 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 CFBP00751 764 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 APBA1Q02410 837 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 LRRC63Q05C16 580 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 MAN2A1Q16706 1144 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 HYIQ5T013 277 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 GOLGA1Q92805 767 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 TMOD2Q9NZR1 351 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 FHOD1Q9Y613 1164 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 KDM3AQ9Y4C1 1321 aa13.36□□□□□ -0.27
COL27A1-202ENST00000451716 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-202ENST00000451716 ZNF76P36508 570 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 CASP5P51878 434 aa13.35□□□□□ -0.27
COL27A1-202ENST00000451716 PSMD2Q13200 908 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms