RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 FOXC1Q12948 553 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 KIAA0319Q5VV43 1072 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC01961-201ENST00000449954 EEPD1Q7L9B9 569 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 EFHBQ8N7U6 833 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 OR6J1Q8NGC5 347 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 MORC4Q8TE76 937 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 HINFPQ9BQA5 517 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 RIOK1Q9BRS2 568 aaKnown RBP9.46□□□□□ -0.9
LINC01961-201ENST00000449954 WDR11Q9BZH6 1224 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 CLEC1BQ9P126 229 aa9.46□□□□□ -0.9
LINC01961-201ENST00000449954 GPR179Q6PRD1 2367 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 LOC102724159A0A0B4J2E5 919 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 FSD2A1L4K1 749 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 A6NJR5 290 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 GRM6O15303 877 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC01961-201ENST00000449954 MMP16P51512 607 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 MTX1Q13505 466 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 PWP2Q15269 919 aaKnown RBP9.45□□□□□ -0.9
LINC01961-201ENST00000449954 TKFCQ3LXA3 575 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 TMEM63BQ5T3F8 832 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 DHX38Q92620 1227 aaKnown RBP9.45□□□□□ -0.9
LINC01961-201ENST00000449954 RUBCNQ92622 972 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 TOP1MTQ969P6 601 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 CTAGE1Q96RT6 745 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 NUP88Q99567 741 aaPredicted RBP9.45□□□□□ -0.9
LINC01961-201ENST00000449954 MFSD1Q9H3U5 465 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 GPR108Q9NPR9 543 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 SORCS3Q9UPU3 1222 aa9.45□□□□□ -0.9
LINC01961-201ENST00000449954 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
LINC01961-201ENST00000449954 MAGEB6P1A0A0J9YX57 407 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 RBM47A0AV96 593 aaKnown RBP9.44□□□□□ -0.9
LINC01961-201ENST00000449954 BMPR1AP36894 532 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 PTK7Q13308 1070 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 ANGPT1Q15389 498 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 RSPO4Q2I0M5 234 aaPredicted RBP9.44□□□□□ -0.9
LINC01961-201ENST00000449954 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
LINC01961-201ENST00000449954 CCDC105Q8IYK2 499 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 FIBCD1Q8N539 461 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 SUSD6Q92537 303 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 PRKRIP1Q9H875 184 aaPredicted RBP9.44□□□□□ -0.9
LINC01961-201ENST00000449954 DCP1AQ9NPI6 582 aaPredicted RBP9.44□□□□□ -0.9
LINC01961-201ENST00000449954 RNF146Q9NTX7 359 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 FEM1BQ9UK73 627 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
LINC01961-201ENST00000449954 F5H6K3 240 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 GDF9O60383 454 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
LINC01961-201ENST00000449954 KLRC3Q07444 240 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 PDE4DQ08499 809 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 ZC3H14Q6PJT7 736 aaKnown RBP9.43□□□□□ -0.9
LINC01961-201ENST00000449954 AMOTL1Q8IY63 956 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 KREMEN2Q8NCW0 462 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 DBF4BQ8NFT6 615 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 CYP2W1Q8TAV3 490 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 DYNLL2Q96FJ2 89 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 CHAMP1Q96JM3 812 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 IFIH1Q9BYX4 1025 aaKnown RBP9.43□□□□□ -0.9
LINC01961-201ENST00000449954 CYP39A1Q9NYL5 469 aa9.43□□□□□ -0.9
LINC01961-201ENST00000449954 ADD3Q9UEY8 706 aaKnown RBP9.43□□□□□ -0.9
LINC01961-201ENST00000449954 GREB1LQ9C091 1923 aaPredicted RBP9.43□□□□□ -0.9
LINC01961-201ENST00000449954 ADGRA3Q8IWK6 1321 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 NDUFB10O96000 172 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 ADRB1P08588 477 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 MS4A1P11836 297 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 CDK8P49336 464 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 PRR20EP86478 221 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 PRR20CP86479 221 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 PRR20DP86480 221 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 PRR20BP86481 221 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 PRR20AP86496 221 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 DMWDQ09019 674 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 G3BP1Q13283 466 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC01961-201ENST00000449954 MBTPS1Q14703 1052 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 PLEKHG4Q58EX7 1191 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 ZNF618Q5T7W0 954 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 RETREG3Q86VR2 466 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
LINC01961-201ENST00000449954 LRRC47Q8N1G4 583 aaKnown RBP9.42□□□□□ -0.9
LINC01961-201ENST00000449954 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
LINC01961-201ENST00000449954 IL17RAQ96F46 866 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 DBNDD2Q9BQY9 259 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 GTF2IRD1Q9UHL9 959 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
LINC01961-201ENST00000449954 SYNPO2Q9UMS6 1093 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 NR2E1Q9Y466 385 aa9.42□□□□□ -0.9
LINC01961-201ENST00000449954 UPP2O95045 317 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 BRD1O95696 1058 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 GLP2RO95838 553 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 LINC00271P0C7V0 271 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 CYP2D6P10635 497 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 AOC1P19801 751 aa9.41□□□□□ -0.9
LINC01961-201ENST00000449954 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms