RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TAF11Q15544 211 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 NAIF1Q69YI7 327 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-204ENST00000449510 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 DBR1Q9UK59 544 aaKnown RBP13.53□□□□□ -0.24
UBE3B-204ENST00000449510 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
UBE3B-204ENST00000449510 ADCY7P51828 1080 aa13.52□□□□□ -0.24
UBE3B-204ENST00000449510 POLE2P56282 527 aa13.52□□□□□ -0.24
UBE3B-204ENST00000449510 PRR16Q569H4 304 aa13.52□□□□□ -0.24
UBE3B-204ENST00000449510 HAUS3Q68CZ6 603 aa13.52□□□□□ -0.24
UBE3B-204ENST00000449510 KLHL14Q9P2G3 628 aa13.52□□□□□ -0.24
UBE3B-204ENST00000449510 NPHP3-ACAD11A0A0J9YXS1 232 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 CCDC169A6NNP5 214 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 E9PMD0 336 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 OPLAHO14841 1288 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 IFNB1P01574 187 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 SP4Q02446 784 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 EAPPQ56P03 285 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-204ENST00000449510 PAPD7Q5XG87 772 aaKnown RBP13.52□□□□□ -0.25
UBE3B-204ENST00000449510 CCDC77Q9BR77 488 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 TRIM7Q9C029 511 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 ITIH6Q6UXX5 1313 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 EXOC3O60645 756 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 SERPING1P05155 500 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 EVX2Q03828 476 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 ZRSR2Q15696 482 aaKnown RBP13.52□□□□□ -0.25
UBE3B-204ENST00000449510 ZNF746Q6NUN9 644 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-204ENST00000449510 WDR59Q6PJI9 974 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 RFX8Q6ZV50 586 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 TPH2Q8IWU9 490 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 PIGBQ92521 554 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 GLG1Q92896 1179 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 PSMD1Q99460 953 aa13.52□□□□□ -0.25
UBE3B-204ENST00000449510 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 A0A087X0T9 212 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 LDHCP07864 332 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 FAM228BP0C875 321 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 FGFR4P22455 802 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 AP1ARQ63HQ0 302 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 CREG2Q8IUH2 290 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 STMN4Q9H169 189 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 EPHB6O15197 1021 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 DDAH1O94760 285 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 UPP2O95045 317 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 TDP2O95551 362 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 KRT5P13647 590 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 TAOK1Q7L7X3 1001 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 HOMER3Q9NSC5 361 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 SPATS2LQ9NUQ6 558 aaKnown RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 FAM107AO95990 144 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 RPL13P26373 211 aaKnown RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 PPP1R2P41236 205 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 SNAP25P60880 206 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 TCP10Q12799 353 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 MUM1Q2TAK8 710 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 NSMCE1Q8WV22 266 aa13.51□□□□□ -0.25
UBE3B-204ENST00000449510 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 ACTR5Q9H9F9 607 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-204ENST00000449510 RASGRF2O14827 1237 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 EVI5O60447 810 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 HSD17B3P37058 310 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
UBE3B-204ENST00000449510 DR1Q01658 176 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 MECOMQ03112 1051 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 MTM1Q13496 603 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 TMEM132AQ24JP5 1023 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 RNF10Q8N5U6 811 aaKnown RBP13.5□□□□□ -0.25
UBE3B-204ENST00000449510 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
UBE3B-204ENST00000449510 UBXN2AP68543 259 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 NSMFQ6X4W1 530 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 LMNTD2Q8IXW0 634 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.5□□□□□ -0.25
UBE3B-204ENST00000449510 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 THAP12O43422 761 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 ADCY8P40145 1251 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 ARL6IP4Q66PJ3 421 aaKnown RBP13.5□□□□□ -0.25
UBE3B-204ENST00000449510 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 CCDC127Q96BQ5 260 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 CHMP6Q96FZ7 201 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
UBE3B-204ENST00000449510 DNM3Q9UQ16 869 aa13.5□□□□□ -0.25
UBE3B-204ENST00000449510 SUN1O94901 812 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 CHN1P15882 459 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 AMPD2Q01433 879 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
UBE3B-204ENST00000449510 HDAC9Q9UKV0 1011 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms