RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 CCDC63Q8NA47 563 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 TSG101Q99816 390 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 MTA3Q9BTC8 594 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
TRAK1-206ENST00000449246 PRDX5P30044 214 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 ZNF844Q08AG5 666 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 FIGNQ5HY92 759 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 PDXDC1Q6P996 788 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 MICAL1Q8TDZ2 1067 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.33
TRAK1-206ENST00000449246 SIK3Q9Y2K2 1263 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 L3MBTL1Q9Y468 752 aa12.96□□□□□ -0.33
TRAK1-206ENST00000449246 C21orf2O43822 256 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 TNFRSF8P28908 595 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 FAM83BQ5T0W9 1011 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 C6orf89Q6UWU4 347 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 ZNF572Q7Z3I7 529 aaPredicted RBP12.96□□□□□ -0.34
TRAK1-206ENST00000449246 NELFCDQ8IXH7 590 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 USP38Q8NB14 1042 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 CCDC197Q8NCU1 140 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 NOD2Q9HC29 1040 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 SLAIN2Q9P270 581 aa12.96□□□□□ -0.34
TRAK1-206ENST00000449246 LRP6O75581 1613 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 SLIT2O94813 1529 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 A0A087X0T9 212 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 FAM228BP0C875 321 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 FLT3P36888 993 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 IL6STP40189 918 aaPredicted RBP12.95□□□□□ -0.34
TRAK1-206ENST00000449246 SATB1Q01826 763 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 MYH2Q9UKX2 1941 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 MYL1P05976 194 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
TRAK1-206ENST00000449246 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
TRAK1-206ENST00000449246 CD302Q8IX05 232 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 NSMCE1Q8WV22 266 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 SPDL1Q96EA4 605 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 SPAG5Q96R06 1193 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 PLCB1Q9NQ66 1216 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAK1-206ENST00000449246 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 NID2Q14112 1375 aa12.95□□□□□ -0.34
TRAK1-206ENST00000449246 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 NAPAP54920 295 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 ZSCAN29Q8IWY8 852 aaPredicted RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 ELAC2Q9BQ52 826 aaKnown RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 CCSER1Q9C0I3 900 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 ISCUQ9H1K1 167 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 ERVV-1B6SEH8 477 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 CALRP27797 417 aaKnown RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 BIRC3Q13489 604 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 CRYMQ14894 314 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 WLSQ5T9L3 541 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 IQCDQ96DY2 449 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 PNMA2Q9UL42 364 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 STK38LQ9Y2H1 464 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 TRIM37O94972 964 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 SERPING1P05155 500 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 TFAP4Q01664 338 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 MECOMQ03112 1051 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 MREGQ8N565 214 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 DYDC1Q8WWB3 177 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 CELF1Q92879 486 aaKnown RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
TRAK1-206ENST00000449246 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 SAMD15Q9P1V8 674 aa12.94□□□□□ -0.34
TRAK1-206ENST00000449246 HNRNPH3P31942 346 aaKnown RBP12.93□□□□□ -0.34
TRAK1-206ENST00000449246 NAB2Q15742 525 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 UAP1Q16222 522 aaPredicted RBP12.93□□□□□ -0.34
TRAK1-206ENST00000449246 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 GLIS3Q8NEA6 775 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 BAP1Q92560 729 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 CHMP6Q96FZ7 201 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 PSMD1Q99460 953 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 DCP1AQ9NPI6 582 aaPredicted RBP12.93□□□□□ -0.34
TRAK1-206ENST00000449246 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 TTI1O43156 1089 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 PJA2O43164 708 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 CUL1Q13616 776 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 ASIC2Q16515 512 aa12.93□□□□□ -0.34
TRAK1-206ENST00000449246 CAVIN4Q5BKX8 364 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms