RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ACRP10323 421 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 SREBF1P36956 1147 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 CCL23P55773 120 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 AP3B2Q13367 1082 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 MFSD10Q14728 455 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 GPNMBQ14956 572 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 FAM47CQ5HY64 1035 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 ZNF365Q70YC5 407 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 PGBD1Q96JS3 809 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
RTFDC1-204ENST00000449062 GSTTP1A0A1W2PQM5 241 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 LGALS2P05162 132 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 CYP3A4P08684 503 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 ZNF200P98182 395 aaPredicted RBP16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 RBL2Q08999 1139 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 PTGISQ16647 500 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 ALG1Q9BT22 464 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 SLC26A6Q9BXS9 759 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 KCNH7Q9NS40 1196 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 TPCN1Q9ULQ1 816 aa16.1■□□□□ 0.17
RTFDC1-204ENST00000449062 H3BRB1 525 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 ARP10275 920 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 SMAD3P84022 425 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 MTMR1Q13613 665 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 CEP55Q53EZ4 464 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 JAKMIP3Q5VZ66 844 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 C7orf31Q8N865 590 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 HERVK_113Q902F9 699 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 SCLYQ96I15 445 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 KATNAL1Q9BW62 490 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 TUT1Q9H6E5 874 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 SH3GLB2Q9NR46 395 aa16.09■□□□□ 0.17
RTFDC1-204ENST00000449062 PFKFB2O60825 505 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 IQCF3P0C7M6 154 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 ADAM17P78536 824 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 ARHGAP4P98171 946 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 TRAF7Q6Q0C0 670 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 Q7L0L9 218 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 NIPA1Q7RTP0 329 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 WNT8BQ93098 351 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 RNPC3Q96LT9 517 aaKnown RBP16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 MTMR10Q9NXD2 777 aa16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
RTFDC1-204ENST00000449062 CHD9Q3L8U1 2897 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 FAM86B1E9PN63 330 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 DHX15O43143 795 aaKnown RBP16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 FGBP02675 491 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 FAM86B2P0C5J1 330 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 GNA11P29992 359 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 AK2P54819 239 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 SSRP1Q08945 709 aaKnown RBP16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 SCRN1Q12765 414 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 PTK7Q13308 1070 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 ITGB3BPQ13352 177 aaPredicted RBP16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 NPY5RQ15761 445 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 MCTP2Q6DN12 878 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 PSRC1Q6PGN9 363 aaPredicted RBP16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 RPUSD2Q8IZ73 545 aaKnown RBP16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 DEFB123Q8N688 67 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 SEPT1Q8WYJ6 367 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 PCYT2Q99447 389 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 VPS54Q9P1Q0 977 aa16.07■□□□□ 0.16
RTFDC1-204ENST00000449062 NFASCO94856 1347 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 M0R2N6 131 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 NOP56O00567 594 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 ATG7O95352 703 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 CIITAP33076 1130 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 STK3Q13188 491 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 BFSP2Q13515 415 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 SERINC5Q86VE9 423 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 TRIM50Q86XT4 487 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 CAGE1Q8TC20 777 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 AIFM3Q96NN9 605 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
RTFDC1-204ENST00000449062 LGR5O75473 907 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 DEXIO95424 95 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 CKBP12277 381 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms