RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CCNE1P24864 410 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 CCNG1P51959 295 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 EIF3BP55884 814 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 COPS2P61201 443 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 KCTD19Q17RG1 926 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 CCDC57Q2TAC2 916 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 LRRC23Q53EV4 343 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 ZNF654Q8IZM8 581 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 GIMAP8Q8ND71 665 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 SHISA4Q96DD7 197 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 GORASP1Q9BQQ3 440 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 PHF20Q9BVI0 1012 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 AP1M1Q9BXS5 423 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 LRRC4CQ9HCJ2 640 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 ATP8A1Q9Y2Q0 1164 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 POLE2P56282 527 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 NUGGCQ68CJ6 796 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 CNBD1Q8NA66 436 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 DDX47Q9H0S4 455 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 LMCD1Q9NZU5 365 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 AFDNP55196 1824 aaKnown RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 FLOT1O75955 427 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 CIAO1O76071 339 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 NPTXRO95502 500 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 KLRC1P26715 233 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 ALDH3A1P30838 453 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 GBP1P32455 592 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 RPS6KA1Q15418 735 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 AKNAD1Q5T1N1 836 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 ZSCAN29Q8IWY8 852 aaPredicted RBP10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 FBF1Q8TES7 1133 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 NLRP3Q96P20 1036 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 PLIN2Q99541 437 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 TMEM59LQ9UK28 342 aa10.3□□□□□ -0.76
SYNPO2-204ENST00000448416 SMIM23A6NLE4 172 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 SHBGP04278 402 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 IL17AQ16552 155 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 APLFQ8IW19 511 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 GBP7Q8N8V2 638 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 FAM81AQ8TBF8 368 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 ATXN2LQ8WWM7 1075 aaKnown RBP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 MYH1P12882 1939 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 NKRFO15226 690 aaKnown RBP eCLIP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 RHOBTB3O94955 611 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 NAB2Q15742 525 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 CCDC84Q86UT8 332 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 DPH5Q9H2P9 285 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 V9GY48 417 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 NEO1Q92859 1461 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 LMO7Q8WWI1 1683 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 ZNF532Q9HCE3 1301 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 A0A1B0GVG6 124 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 ITGA6P23229 1130 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 TUBP50607 506 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 PROSER2Q86WR7 435 aaPredicted RBP10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 PBKQ96KB5 322 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 SYT15Q9BQS2 421 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 MTFR1LQ9H019 292 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 ARHGEF3Q9NR81 526 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 WDR35Q9P2L0 1181 aa10.29□□□□□ -0.76
SYNPO2-204ENST00000448416 SSU72P8A0A1W2PR75 194 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 KLRC4O43908 158 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 SNX3O60493 162 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PDE6CP51160 858 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 USP4Q13107 963 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 HLFQ16534 295 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 TMEM154Q6P9G4 183 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PIK3AP1Q6ZUJ8 805 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 ZNF513Q8N8E2 541 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 SCFD2Q8WU76 684 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 RBM41Q96IZ5 413 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 DISC1Q9NRI5 854 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 AMACRQ9UHK6 382 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 SIK3Q9Y2K2 1263 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 USP15Q9Y4E8 981 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 DISP2A7MBM2 1401 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 ABLIM1O14639 778 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 MAP3K13O43283 966 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 SUN1O94901 812 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 MMP13P45452 471 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 ZC3H6P61129 1189 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PDE4DQ08499 809 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 BNIP1Q12981 228 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 KIAA0753Q2KHM9 967 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 ASTE1Q2TB18 679 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 SLC9C1Q4G0N8 1177 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 ANKLE2Q86XL3 938 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 IFNL3Q8IZI9 196 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 CCDC113Q9H0I3 377 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 LRRC42Q9Y546 428 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 NID2Q14112 1375 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PARP4Q9UKK3 1724 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 RGS16O15492 202 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 PYGBP11216 843 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 LONP1P36776 959 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 RAD23BP54727 409 aa10.28□□□□□ -0.76
SYNPO2-204ENST00000448416 KLC1Q07866 573 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms