RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 NEFMP07197 916 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 THBDP07204 575 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 SRGNP10124 158 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 SLC5A1P13866 664 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 ALAS2P22557 587 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 LTBRP36941 435 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 TM4SF4P48230 202 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 ST5P78524 1137 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 TRIM14Q14142 442 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 PUM3Q15397 648 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 ARHGAP44Q17R89 818 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 EXOSC6Q5RKV6 272 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 SHISA2Q6UWI4 295 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 LBX2Q6XYB7 198 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 CCDC149Q6ZUS6 474 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 MIER2Q8N344 545 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 NKAPQ8N5F7 415 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 MFSD2AQ8NA29 543 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 PPHLN1Q8NEY8 458 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 DNAJB8Q8NHS0 232 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 PANK1Q8TE04 598 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 ISL2Q96A47 359 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 PGBD4Q96DM1 585 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 MPP4Q96JB8 637 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 CCDC138Q96M89 665 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 SSBP4Q9BWG4 385 aaPredicted RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 ASPNQ9BXN1 380 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 PRDM14Q9GZV8 571 aa4.68□□□□□ -1.66
PMS1-216ENST00000447734 TRMT13Q9NUP7 481 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 NOC2LQ9Y3T9 749 aaKnown RBP4.68□□□□□ -1.66
PMS1-216ENST00000447734 H0Y8X5 98 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 H7C1D1 291 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 CCER2I3L3R5 266 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 TGM5O43548 720 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 TIMM44O43615 452 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 MSCO60682 206 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 ADAM11O75078 769 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 KRT37O76014 449 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 LRIG2O94898 1065 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 GPR3P46089 330 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 POU4F1Q01851 419 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 SNW1Q13573 536 aaKnown RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 KCTD2Q14681 263 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 LLGL1Q15334 1064 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 TERF2Q15554 542 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 ELF2Q15723 593 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 PDCD2Q16342 344 aaPredicted RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 KIZQ2M2Z5 673 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 JAKMIP3Q5VZ66 844 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 CREB3L3Q68CJ9 461 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 TTLL7Q6ZT98 887 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 ILDR2Q71H61 639 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 ARMCX6Q7L4S7 300 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 RASSF3Q86WH2 238 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 GRAMD1CQ8IYS0 662 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 GALNT11Q8NCW6 608 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 FAM156AQ8NDB6 213 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 NPLOC4Q8TAT6 608 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 DIS3LQ8TF46 1054 aaKnown RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 FRS2Q8WU20 508 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 RNF141Q8WVD5 230 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 LMBR1Q8WVP7 490 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 CCT6BQ92526 530 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 COPS5Q92905 334 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 TRIM63Q969Q1 353 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 FBXW5Q969U6 566 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 SKA1Q96BD8 255 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 FBXL18Q96ME1 805 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 NEUROD6Q96NK8 337 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 ACO2Q99798 780 aaKnown RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 TOPORSQ9NS56 1045 aaPredicted RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 CCM2LQ9NUG4 571 aaPredicted RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 FNIP2Q9P278 1114 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 NPFFR2Q9Y5X5 522 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 ST14Q9Y5Y6 855 aa4.67□□□□□ -1.66
PMS1-216ENST00000447734 COL17A1Q9UMD9 1497 aaPredicted RBP4.67□□□□□ -1.66
PMS1-216ENST00000447734 FAM227AF5H4B4 570 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 TCERG1O14776 1098 aaKnown RBP4.66□□□□□ -1.66
PMS1-216ENST00000447734 HRGP04196 525 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 CD3EP07766 207 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 LSP1P33241 339 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 CD68P34810 354 aaPredicted RBP4.66□□□□□ -1.66
PMS1-216ENST00000447734 ETV3P41162 512 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 GTF2A2P52657 109 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 FAM193AP78312 1265 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 PHC1P78364 1004 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 BTKQ06187 659 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 TRIM28Q13263 835 aaKnown RBP4.66□□□□□ -1.66
PMS1-216ENST00000447734 KCNAB2Q13303 367 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 IFIT5Q13325 482 aaKnown RBP4.66□□□□□ -1.66
PMS1-216ENST00000447734 ZNF174Q15697 407 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 KIAA0753Q2KHM9 967 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 ATAT1Q5SQI0 421 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 DUSP27Q5VZP5 1158 aa4.66□□□□□ -1.66
PMS1-216ENST00000447734 E4F1Q66K89 784 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms