RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 NPHP3-ACAD11A0A0J9YXS1 232 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 MEIS1O00470 390 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 TRIM21P19474 475 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 INPP5BP32019 993 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 PTGER2P43116 358 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 GNG11P61952 73 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 SYCP1Q15431 976 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 TSR1Q2NL82 804 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 TBC1D10BQ4KMP7 808 aaPredicted RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 MIIPQ5JXC2 388 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 FKBP15Q5T1M5 1219 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 FOXR2Q6PJQ5 311 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 MTERF4Q7Z6M4 381 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 LPAR1Q92633 364 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 PCMTD1Q96MG8 357 aaPredicted RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 NUP58Q9BVL2 599 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 L2HGDHQ9H9P8 463 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 CNOT7Q9UIV1 285 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 CAPN11Q9UMQ6 739 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 CD2APQ9Y5K6 639 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 SLU7O95391 586 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 PSMC6P62333 389 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 ERVK-24P63145 666 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 UBXN2AP68543 259 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 RASSF7Q02833 373 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 CYP4A11Q02928 519 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.021e-7■■■□□ 18.8
RBM39-216ENST00000444878 HSP90AA2PQ14568 343 aaPredicted RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 KIF4BQ2VIQ3 1234 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 SYT2Q8N9I0 419 aaPredicted RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 MRPL44Q9H9J2 332 aaKnown RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 GINM1Q9NU53 330 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 HACL1Q9UJ83 578 aa15.19■□□□□ 0.02
RBM39-216ENST00000444878 ZNF215Q9UL58 517 aaPredicted RBP15.19■□□□□ 0.02
RBM39-216ENST00000444878 RRP9O43818 475 aaKnown RBP15.18■□□□□ 0.02
RBM39-216ENST00000444878 CTNND1O60716 968 aaKnown RBP15.18■□□□□ 0.02
RBM39-216ENST00000444878 KIF20AO95235 890 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 ICAM1P05362 532 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 R3HDM1Q15032 1099 aaKnown RBP15.18■□□□□ 0.02
RBM39-216ENST00000444878 ARSHQ5FYA8 562 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 AGBL1Q96MI9 1066 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 MAP7D2Q96T17 732 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
RBM39-216ENST00000444878 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
RBM39-216ENST00000444878 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 ASTN2O75129 1339 aaPredicted RBP15.18■□□□□ 0.02
RBM39-216ENST00000444878 LTBP3Q9NS15 1303 aa15.18■□□□□ 0.02
RBM39-216ENST00000444878 FRMD3A2A2Y4 597 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 FKBP3Q00688 224 aaKnown RBP15.17■□□□□ 0.02
RBM39-216ENST00000444878 NCBP1Q09161 790 aaKnown RBP15.17■□□□□ 0.02
RBM39-216ENST00000444878 MAN2A1Q16706 1144 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 VWA3BQ502W6 1294 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 CEP55Q53EZ4 464 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 OTOP1Q7RTM1 612 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 ERGIC2Q96RQ1 377 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 LZTFL1Q9NQ48 299 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 PCDHA2Q9Y5H9 948 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 FZD9O00144 591 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 EML1O00423 815 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 TRAF5O00463 557 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 CASQ1P31415 396 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 LRRC55Q6ZSA7 311 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 DNAJC7Q99615 494 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 NDST4Q9H3R1 872 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 EMILIN3Q9NT22 766 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 ZNF536O15090 1300 aa15.17■□□□□ 0.02
RBM39-216ENST00000444878 MYH11P35749 1972 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
RBM39-216ENST00000444878 GAS7O60861 476 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 PSMD10O75832 226 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 URI1O94763 535 aaPredicted RBP15.16■□□□□ 0.02
RBM39-216ENST00000444878 SETQ01105 290 aaPredicted RBP15.16■□□□□ 0.02
RBM39-216ENST00000444878 GIT2Q14161 759 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 NELFCDQ8IXH7 590 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 ANKRD7Q92527 254 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 SLC5A5Q92911 643 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 CHP1Q99653 195 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 FGFBP2Q9BYJ0 223 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 TANGO6Q9C0B7 1094 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 TTYH3Q9C0H2 523 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 BHMT2Q9H2M3 363 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 RGL1Q9NZL6 768 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
RBM39-216ENST00000444878 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms