RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 LIMA1Q9UHB6 759 aaKnown RBP15.71■□□□□ 0.11
LIMD1-202ENST00000440097 CNOT7Q9UIV1 285 aaKnown RBP15.71■□□□□ 0.11
LIMD1-202ENST00000440097 ASTN2O75129 1339 aaPredicted RBP15.71■□□□□ 0.11
LIMD1-202ENST00000440097 E9PMD0 336 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 OPLAHO14841 1288 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 KRT18P05783 430 aaKnown RBP15.7■□□□□ 0.1
LIMD1-202ENST00000440097 SREBF1P36956 1147 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 CHMP4BP1P59074 171 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 CYP2W1Q8TAV3 490 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 PUF60Q9UHX1 559 aaKnown RBP15.7■□□□□ 0.1
LIMD1-202ENST00000440097 GCOM1H8Y6P7 765 aaPredicted RBP15.7■□□□□ 0.1
LIMD1-202ENST00000440097 POLR2MP0CAP2 368 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 MTF1Q14872 753 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 HAUS3Q68CZ6 603 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 ANKZF1Q9H8Y5 726 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 CASP14P31944 242 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 SEMA3FQ13275 785 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 BEND6Q5SZJ8 279 aaPredicted RBP15.7■□□□□ 0.1
LIMD1-202ENST00000440097 ANKRD40Q6AI12 368 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 SRGAP1Q7Z6B7 1085 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 CPXCR1Q8N123 301 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 KIAA0895Q8NCT3 520 aa15.7■□□□□ 0.1
LIMD1-202ENST00000440097 ZBED3Q96IU2 234 aaPredicted RBP15.7■□□□□ 0.1
LIMD1-202ENST00000440097 SMCHD1A6NHR9 2005 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 CYP3A7-CYP3A51PA0A087WV96 503 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 N4BP1O75113 896 aaKnown RBP15.69■□□□□ 0.1
LIMD1-202ENST00000440097 POTEIP0CG38 1075 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 CYP3A7P24462 503 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 CCNE1P24864 410 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 RPS12P25398 132 aaKnown RBP15.69■□□□□ 0.1
LIMD1-202ENST00000440097 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
LIMD1-202ENST00000440097 TMEM119Q4V9L6 283 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 TTI2Q6NXR4 508 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 POTEGQ6S5H5 508 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 POTEEQ6S8J3 1075 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 FAM160B2Q86V87 743 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 ERMNQ8TAM6 284 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 TANGO6Q9C0B7 1094 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 TBC1D7Q9P0N9 293 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 HACL1Q9UJ83 578 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 MEIS1O00470 390 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 MTIF2P46199 727 aaKnown RBP15.69■□□□□ 0.1
LIMD1-202ENST00000440097 LRRC41Q15345 812 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 FOXR1Q6PIV2 292 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 HDXQ7Z353 690 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 PNKPQ96T60 521 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 DEFB129Q9H1M3 183 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 THAP9Q9H5L6 903 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 FEM1BQ9UK73 627 aa15.69■□□□□ 0.1
LIMD1-202ENST00000440097 MRPL11Q9Y3B7 192 aaKnown RBP15.69■□□□□ 0.1
LIMD1-202ENST00000440097 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 PPP1R2P41236 205 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 CYP4A11Q02928 519 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 DGKZQ13574 1117 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 MOXD1Q6UVY6 613 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 LDHDQ86WU2 507 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 LZTFL1Q9NQ48 299 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 CCPG1Q9ULG6 757 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 KIF13BQ9NQT8 1826 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 CHMP2AO43633 222 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 IVLP07476 585 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 PLA2G4BP0C869 781 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 EEF1GP26641 437 aaKnown RBP15.68■□□□□ 0.1
LIMD1-202ENST00000440097 IRX3P78415 501 aaPredicted RBP15.68■□□□□ 0.1
LIMD1-202ENST00000440097 PRAMEF18Q5VWM3 479 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 GPBP1Q86WP2 473 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 IRF2BP1Q8IU81 584 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 ETNPPLQ8TBG4 499 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 HNRNPLLQ8WVV9 542 aaKnown RBP15.68■□□□□ 0.1
LIMD1-202ENST00000440097 PCMTD1Q96MG8 357 aaPredicted RBP15.68■□□□□ 0.1
LIMD1-202ENST00000440097 RANBP17Q9H2T7 1088 aaKnown RBP15.68■□□□□ 0.1
LIMD1-202ENST00000440097 HOMER2Q9NSB8 354 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 FAN1Q9Y2M0 1017 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 CENPFP49454 3210 aa15.68■□□□□ 0.1
LIMD1-202ENST00000440097 LRRC10BA6NIK2 292 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 RNF225M0QZC1 329 aaPredicted RBP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 NKRFO15226 690 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 MED24O75448 989 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 INPP5BP32019 993 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 ZNF280AP59817 542 aaPredicted RBP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 KIF4BQ2VIQ3 1234 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 CNOT6LQ96LI5 555 aaKnown RBP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 TUBGCP2Q9BSJ2 902 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 PANK4Q9NVE7 773 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 CTDP1Q9Y5B0 961 aaPredicted RBP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 A0A0U1RQJ8 604 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 SOWAHDA6NJG2 315 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 PIK3CDO00329 1044 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 MSH4O15457 936 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 GYPCP04921 128 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 ERCC3P19447 782 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 PBX1P40424 430 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 FXR1P51114 621 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 Q4G0T1 1027 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms