RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 GPNMBQ14956 572 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 PPP2R2DQ66LE6 453 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 HEATR3Q7Z4Q2 680 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 SERINC5Q86VE9 423 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 GIMAP8Q8ND71 665 aaPredicted RBP18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 GPRASP2Q96D09 838 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 CDHR1Q96JP9 859 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
SNRPD3-204ENST00000439775 SPDYE3A6NKU9 549 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 NBNO60934 754 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 FUT2Q10981 343 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 HIC1Q14526 733 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 RTN1Q16799 776 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 PPP1R18Q6NYC8 613 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 CNKSR3Q6P9H4 555 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 TRAF7Q6Q0C0 670 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 KCNB2Q92953 911 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 WNT8BQ93098 351 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 TCEANC2Q96MN5 208 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 VCANP13611 3396 aa18.69■□□□□ 0.58
SNRPD3-204ENST00000439775 C17orf102A2RUQ5 167 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 hCG_1984214I3L0E3 225 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 SMIM10L2AP0DMW4 78 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 SMIM10L2BP0DMW5 78 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 MYOGP15173 224 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 UBE2SQ16763 222 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 HERC6Q8IVU3 1022 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 ZNF713Q8N859 430 aaPredicted RBP18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 EHMT1Q9H9B1 1298 aa18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 ZNF215Q9UL58 517 aaPredicted RBP18.68■□□□□ 0.58
SNRPD3-204ENST00000439775 KLF18A0A0U1RQI7 1052 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 KCNA2P16389 499 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 ITGB5P18084 799 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 ZNF618Q5T7W0 954 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 USP38Q8NB14 1042 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 ATP6V0A1Q93050 837 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 PCDHA6Q9UN73 950 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 PCDHA8Q9Y5H6 950 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 UBIAD1Q9Y5Z9 338 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 EMSYQ7Z589 1322 aa18.67■□□□□ 0.58
SNRPD3-204ENST00000439775 CUL9Q8IWT3 2517 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 EFCAB14O75071 495 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 CAND2O75155 1236 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 CA3P07451 260 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 HSPA4P34932 840 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 KCNJ6P48051 423 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 NAPAP54920 295 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 MTMR1Q13613 665 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 ADGRE1Q14246 886 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 TRIM50Q86XT4 487 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 TET1Q8NFU7 2136 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 RIC8AQ9NPQ8 531 aa18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 TRIP12Q14669 1992 aaPredicted RBP18.66■□□□□ 0.58
SNRPD3-204ENST00000439775 ABHD14A-ACY1A0A1B0GW23 586 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 KIF28PB7ZC32 967 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 MAFGO15525 162 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 GNAT1P11488 350 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 THPOP40225 353 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 MBTPS1Q14703 1052 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 TYW1BQ6NUM6 668 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 COL25A1Q9BXS0 654 aaPredicted RBP18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 RNPEPQ9H4A4 650 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 FAM217BQ9NTX9 383 aaPredicted RBP18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 BARHL2Q9NY43 387 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 TELO2Q9Y4R8 837 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 NID2Q14112 1375 aa18.65■□□□□ 0.58
SNRPD3-204ENST00000439775 STXBP3O00186 592 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 TREHO43280 583 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 ATP9AO75110 1047 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 FOSP01100 380 aaPredicted RBP18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 CDC27P30260 824 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 TCF7P36402 384 aaPredicted RBP18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 ADAM17P78536 824 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 FGD1P98174 961 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 SP4Q02446 784 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 FBXL16Q8N461 479 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 GLT8D2Q9H1C3 349 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 SNX14Q9Y5W7 946 aa18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 V9GY48 417 aaPredicted RBP18.64■□□□□ 0.57
SNRPD3-204ENST00000439775 DOCK5Q9H7D0 1870 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 CCDC196A0A1B0GTZ2 297 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 RSPH10B2B2RC85 870 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 LGR5O75473 907 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 REC8O95072 547 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 RSPH10BP0C881 870 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 ADCY7P51828 1080 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 IKBKEQ14164 716 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 TCTN1Q2MV58 587 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 UTP14CQ5TAP6 766 aaKnown RBP18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 LMBR1Q8WVP7 490 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 SEPT1Q8WYJ6 367 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 JAKMIP1Q96N16 626 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms