RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PANK4Q9NVE7 773 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 DDX20Q9UHI6 824 aaKnown RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 LMO7Q8WWI1 1683 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 GOLGA6L10A0A0M3HER8 536 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 CETN3O15182 167 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 RGS16O15492 202 aaPredicted RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 TTI1O43156 1089 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 GCKP35557 465 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 COPB2P35606 906 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 ADCY1Q08828 1119 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 RNF10Q8N5U6 811 aaKnown RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 IQCDQ96DY2 449 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 PIGSQ96S52 555 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 BRIP1Q9BX63 1249 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 MLXIPLQ9NP71 852 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 ARPP21Q9UBL0 812 aaPredicted RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 SPDYE3A6NKU9 549 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 FSBPO95073 299 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 KIF4AO95239 1232 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 HIBADHP31937 336 aaKnown RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 MTMR3Q13615 1198 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 CDC37Q16543 378 aaPredicted RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 TRMT1LQ7Z2T5 733 aaKnown RBP9.91□□□□□ -0.82
COPB1-202ENST00000439561 CCDC50Q8IVM0 306 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 ANKRD42Q8N9B4 389 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 AK8Q96MA6 479 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 TRIM51Q9BSJ1 452 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 SWAP70Q9UH65 585 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 PNMA2Q9UL42 364 aa9.91□□□□□ -0.82
COPB1-202ENST00000439561 A0A1W2PQJ5 194 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 MPHOSPH10O00566 681 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 TDP2O95551 362 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 EPB41P11171 864 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 PRLRP16471 622 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 SMTNP53814 917 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 ERVK-9P63128 1117 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 MKRN4PQ13434 485 aaPredicted RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 ZKSCAN8Q15776 578 aaPredicted RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 DENND2CQ68D51 928 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 UNC13DQ70J99 1090 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 CCDC65Q8IXS2 484 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 IQCKQ8N0W5 287 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 RIOK1Q9BRS2 568 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 NOC2LQ9Y3T9 749 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 ATP6V0A2Q9Y487 856 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 PCDHB13Q9Y5F0 798 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 MYH10P35580 1976 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 FGGP02679 453 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 MMEP08473 750 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 ZNF211Q13398 564 aaPredicted RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 DIXDC1Q155Q3 683 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 QPCTQ16769 361 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 CCDC38Q502W7 563 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 ALKBH5Q6P6C2 394 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 TMED8Q6PL24 325 aaPredicted RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 OTUD6AQ7L8S5 288 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 USP38Q8NB14 1042 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 RAPGEF5Q92565 580 aa9.9□□□□□ -0.82
COPB1-202ENST00000439561 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 INTS9Q9NV88 658 aaKnown RBP9.9□□□□□ -0.82
COPB1-202ENST00000439561 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
COPB1-202ENST00000439561 FLOT1O75955 427 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 H2AFZP0C0S5 128 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 CYP19A1P11511 503 aaPredicted RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 SLC8A1P32418 973 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 H2AFVQ71UI9 128 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 HOOK3Q86VS8 718 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 GPBP1Q86WP2 473 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 SGSM3Q96HU1 749 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 PSMD1Q99460 953 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 FMO2Q99518 471 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LRRC27Q9C0I9 530 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 CEP72Q9P209 647 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 KIAA1024Q9UPX6 916 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 SNX24Q9Y343 169 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LAD1O00515 517 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 ITGA4P13612 1032 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 NR2F2P24468 414 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LRRC63Q05C16 580 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 ITGB3BPQ13352 177 aaPredicted RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 PICALMQ13492 652 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 UBE2SQ16763 222 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LRCH2Q5VUJ6 765 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 TNS3Q68CZ2 1445 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 C7orf25Q9BPX7 421 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 TMBIM4Q9HC24 238 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 TPX2Q9ULW0 747 aaKnown RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 SIK3Q9Y2K2 1263 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 BAG3O95817 575 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 LDHBP07195 334 aaKnown RBP9.89□□□□□ -0.83
COPB1-202ENST00000439561 PAX7P23759 505 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 KLRK1P26718 216 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 CDC25CP30307 473 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 SCTRP47872 440 aa9.89□□□□□ -0.83
COPB1-202ENST00000439561 KCNQ4P56696 695 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms