RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TMEM260Q9NX78 707 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 PCDHA4Q9UN74 947 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 FLT1P17948 1338 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 KRIT1O00522 736 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 USP17L8P0C7I0 530 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 HSPA9P38646 679 aaKnown RBP14.68□□□□□ -0.06
ACTN1-204ENST00000438964 KCNJ2P63252 427 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ITIH3Q06033 890 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ASTE1Q2TB18 679 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-204ENST00000438964 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 TAX1BP1Q86VP1 789 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 WHAMMQ8TF30 809 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 ZNF512BQ96KM6 892 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-204ENST00000438964 BIN2Q9UBW5 565 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-204ENST00000438964 TMEM94Q12767 1356 aa14.68□□□□□ -0.06
ACTN1-204ENST00000438964 VIMP08670 466 aaKnown RBP14.67□□□□□ -0.06
ACTN1-204ENST00000438964 TNNC1P63316 161 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 KLHL30Q0D2K2 578 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 RPS6KA1Q15418 735 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 MAN2A1Q16706 1144 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 ARL6IP4Q66PJ3 421 aaKnown RBP14.67□□□□□ -0.06
ACTN1-204ENST00000438964 PPP4R3AQ6IN85 833 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 KCNK18Q7Z418 384 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 MICAL1Q8TDZ2 1067 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 CCDC47Q96A33 483 aaKnown RBP14.67□□□□□ -0.06
ACTN1-204ENST00000438964 ABCF3Q9NUQ8 709 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 TRIM33Q9UPN9 1127 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 AGAP1Q9UPQ3 857 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 MYH7BA7E2Y1 1941 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 PNPLA7Q6ZV29 1317 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 KIF1AQ12756 1690 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 CYTH3O43739 400 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 KLRK1P26718 216 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 MEI1Q5TIA1 1274 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 CCT6BQ92526 530 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 TATDN2Q93075 761 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 LBHD1Q9BQE6 289 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-204ENST00000438964 RIOK1Q9BRS2 568 aaKnown RBP14.67□□□□□ -0.06
ACTN1-204ENST00000438964 PLA2G12BQ9BX93 195 aa14.67□□□□□ -0.06
ACTN1-204ENST00000438964 KIF13AQ9H1H9 1805 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 A0A1W2PQJ5 194 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 NOL4O94818 638 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 CHN1P15882 459 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 NOC2LQ9Y3T9 749 aaKnown RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 NUP188Q5SRE5 1749 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 NPHP3-ACAD11A0A0J9YXS1 232 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 A0A1B0GUA9 196 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 DIAPH2O60879 1101 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 ANP32DO95626 131 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 TNFRSF8P28908 595 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 IFI35P80217 286 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 TFAP4Q01664 338 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 SATB1Q01826 763 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 CHRNDQ07001 517 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 OTUD6AQ7L8S5 288 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 LRRC34Q8IZ02 419 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 ARFGAP2Q8N6H7 521 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 PIGBQ92521 554 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 MMTAG2Q9BU76 263 aaKnown RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■■■■ 30.4
ACTN1-204ENST00000438964 GLI3P10071 1580 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 ATXN2Q99700 1313 aaKnown RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 TRIM37O94972 964 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 DRD4P21917 467 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 TRAPPC10P48553 1259 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 CDK17Q00537 523 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 ZNF211Q13398 564 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 NAB2Q15742 525 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 SUSD4Q5VX71 490 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 CCDC63Q8NA47 563 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 PNMA1Q8ND90 353 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 AGAP11Q8TF27 550 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 GLG1Q92896 1179 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 PRMT1Q99873 361 aaKnown RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 PYM1Q9BRP8 204 aaKnown RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 CARD10Q9BWT7 1032 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 ISCUQ9H1K1 167 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 ACTR5Q9H9F9 607 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-204ENST00000438964 PRDM11Q9NQV5 511 aa14.66□□□□□ -0.06
ACTN1-204ENST00000438964 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 MMEP08473 750 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 CCDC24Q8N4L8 307 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 METTL13Q8N6R0 699 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 A6NNZ2 444 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 HNRNPH3P31942 346 aaKnown RBP14.65□□□□□ -0.06
ACTN1-204ENST00000438964 TUBB8Q3ZCM7 444 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 AADACL2Q6P093 401 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 CNNM4Q6P4Q7 775 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 TLDC1Q6P9B6 456 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-204ENST00000438964 DAAM2Q86T65 1068 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 SLC51AQ86UW1 340 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 CD302Q8IX05 232 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 ANKS1AQ92625 1134 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 ZNF622Q969S3 477 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■□□□□ 10.2
ACTN1-204ENST00000438964 MCM9Q9NXL9 1143 aa14.65□□□□□ -0.06
ACTN1-204ENST00000438964 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms