RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 USP14P54578 494 aa28.59■■■□□ 2.17
CPNE1-216ENST00000437340 FAM26FQ5R3K3 315 aa28.59■■■□□ 2.17
CPNE1-216ENST00000437340 REXO1L1PQ8IX06 675 aa28.59■■■□□ 2.17
CPNE1-216ENST00000437340 WDR90Q96KV7 1748 aa28.59■■■□□ 2.17
CPNE1-216ENST00000437340 FRMD3A2A2Y4 597 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 POTEFA5A3E0 1075 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 POTEIP0CG38 1075 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 FXR1P51114 621 aaKnown RBP eCLIP28.58■■■□□ 2.17
CPNE1-216ENST00000437340 CEP55Q53EZ4 464 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 POTEGQ6S5H5 508 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 POTEEQ6S8J3 1075 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 MYOCDQ8IZQ8 938 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 CPLX3Q8WVH0 158 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 ZNF592Q92610 1267 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 SLC5A5Q92911 643 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 WDR18Q9BV38 432 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 ZNF112Q9UJU3 913 aa28.58■■■□□ 2.17
CPNE1-216ENST00000437340 SETQ01105 290 aaPredicted RBP28.57■■■□□ 2.16
CPNE1-216ENST00000437340 DOCK1Q14185 1865 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 MCF2L2Q86YR7 1114 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 SAMD3Q8N6K7 520 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 SYT2Q8N9I0 419 aaPredicted RBP28.57■■■□□ 2.16
CPNE1-216ENST00000437340 TSG101Q99816 390 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.57■■■□□ 2.16
CPNE1-216ENST00000437340 SSC5DA1L4H1 1573 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 KIF20AO95235 890 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 SLC38A10Q9HBR0 1119 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 MAP3K20Q9NYL2 800 aaKnown RBP28.57■■■□□ 2.16
CPNE1-216ENST00000437340 PPP2R3BQ9Y5P8 575 aa28.57■■■□□ 2.16
CPNE1-216ENST00000437340 PSMD10O75832 226 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 FDX1P10109 184 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 PRKCSHP14314 528 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-216ENST00000437340 EPHX2P34913 555 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 MTIF2P46199 727 aaKnown RBP28.56■■■□□ 2.16
CPNE1-216ENST00000437340 PPP2R5CQ13362 524 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 SAMD1Q6SPF0 538 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-216ENST00000437340 OTOP1Q7RTM1 612 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 AGBL1Q96MI9 1066 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 ABHD10Q9NUJ1 306 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 PCDHA2Q9Y5H9 948 aa28.56■■■□□ 2.16
CPNE1-216ENST00000437340 TMTC1Q8IUR5 882 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 SCYL3Q8IZE3 742 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 EIF2AK1Q9BQI3 630 aaKnown RBP28.55■■■□□ 2.16
CPNE1-216ENST00000437340 MEIS1O00470 390 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 CTIFO43310 598 aaKnown RBP28.55■■■□□ 2.16
CPNE1-216ENST00000437340 MUTP22033 750 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 ETF1P62495 437 aaKnown RBP28.55■■■□□ 2.16
CPNE1-216ENST00000437340 ARSHQ5FYA8 562 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 LRCH2Q5VUJ6 765 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 NUP58Q9BVL2 599 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 AS3MTQ9HBK9 375 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 TUFT1Q9NNX1 390 aa28.55■■■□□ 2.16
CPNE1-216ENST00000437340 RPTORQ8N122 1335 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 VCAM1P19320 739 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 TOGARAM2Q6ZUX3 1019 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 USP50Q70EL3 339 aaPredicted RBP28.54■■■□□ 2.16
CPNE1-216ENST00000437340 KRT26Q7Z3Y9 468 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 RETREG2Q8NC44 543 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 HSD17B14Q9BPX1 270 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 NOC4LQ9BVI4 516 aaKnown RBP28.54■■■□□ 2.16
CPNE1-216ENST00000437340 WDR11Q9BZH6 1224 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 EMILIN3Q9NT22 766 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 PPP1R9AQ9ULJ8 1098 aa28.54■■■□□ 2.16
CPNE1-216ENST00000437340 B4DLN1 442 aa28.53■■■□□ 2.16
CPNE1-216ENST00000437340 PES1O00541 588 aaKnown RBP28.53■■■□□ 2.16
CPNE1-216ENST00000437340 KRT18P05783 430 aaKnown RBP28.53■■■□□ 2.16
CPNE1-216ENST00000437340 MTMR2Q13614 643 aa28.53■■■□□ 2.16
CPNE1-216ENST00000437340 CLEC4DQ8WXI8 215 aa28.53■■■□□ 2.16
CPNE1-216ENST00000437340 IQCDQ96DY2 449 aa28.53■■■□□ 2.16
CPNE1-216ENST00000437340 TANGO6Q9C0B7 1094 aa28.53■■■□□ 2.16
CPNE1-216ENST00000437340 PHLPP2Q6ZVD8 1323 aa28.53■■■□□ 2.16
CPNE1-216ENST00000437340 EML1O00423 815 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 EYA4O95677 639 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 CCDC175P0C221 793 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 PSMC6P62333 389 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 TBC1D8BQ0IIM8 1120 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 ZCWPW2Q504Y3 356 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 HERC4Q5GLZ8 1057 aaPredicted RBP28.52■■■□□ 2.16
CPNE1-216ENST00000437340 MIIPQ5JXC2 388 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 DCPSQ96C86 337 aaKnown RBP28.52■■■□□ 2.16
CPNE1-216ENST00000437340 ERGIC2Q96RQ1 377 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 CAPN11Q9UMQ6 739 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 SOWAHDA6NJG2 315 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 FLOT1O75955 427 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 BCRP11274 1271 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 KRT9P35527 623 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 LRRC41Q15345 812 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 DLK2Q6UY11 383 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 LRRC55Q6ZSA7 311 aa28.52■■■□□ 2.16
CPNE1-216ENST00000437340 ADM5C9JUS6 153 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 GAS7O60861 476 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 BACE1P56817 501 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 PABPC4Q13310 644 aaKnown RBP eCLIP28.51■■■□□ 2.157e-7■■■□□ 14.8
CPNE1-216ENST00000437340 GIT2Q14161 759 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 FKBP15Q5T1M5 1219 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 TRIM65Q6PJ69 517 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 CYP26C1Q6V0L0 522 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 NIPA1Q7RTP0 329 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 GLIS3Q8NEA6 775 aa28.51■■■□□ 2.15
CPNE1-216ENST00000437340 MXRA8Q9BRK3 442 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms