RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 PLVAPQ9BX97 442 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 MKNK2Q9HBH9 465 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 RALYQ9UKM9 306 aaKnown RBP12.26□□□□□ -0.45
CPNE1-214ENST00000435747 CCPG1Q9ULG6 757 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-214ENST00000435747 BRD1O95696 1058 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 LINC00271P0C7V0 271 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 SP100P23497 879 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-214ENST00000435747 THPOP40225 353 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 PSEN2P49810 448 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 ANKRD45Q5TZF3 282 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 STAG1Q8WVM7 1258 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 CLP1Q92989 425 aaKnown RBP12.25□□□□□ -0.45
CPNE1-214ENST00000435747 MKL1Q969V6 931 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 CHAMP1Q96JM3 812 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 KATNAL1Q9BW62 490 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 SYNPO2Q9UMS6 1093 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 PLAGL2Q9UPG8 496 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 ADGRA3Q8IWK6 1321 aa12.25□□□□□ -0.45
CPNE1-214ENST00000435747 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 MYH7BA7E2Y1 1941 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 IGHDP01880 384 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 SNAP25P60880 206 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 ZNF200P98182 395 aaPredicted RBP12.24□□□□□ -0.45
CPNE1-214ENST00000435747 KIAA0319Q5VV43 1072 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
CPNE1-214ENST00000435747 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 FLCNQ8NFG4 579 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 CYP2W1Q8TAV3 490 aa12.24□□□□□ -0.45
CPNE1-214ENST00000435747 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 ARIH2O95376 493 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 TTLL1O95922 423 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 GH1P01241 217 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 DNAJB1P25685 340 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-214ENST00000435747 MFSD10Q14728 455 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 DGKDQ16760 1214 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 VPS53Q5VIR6 699 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 CHST3Q7LGC8 479 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 TICAM2Q86XR7 235 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 RUBCNQ92622 972 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 P2RX5Q93086 422 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 CEP95Q96GE4 821 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 TLE6Q9H808 572 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.23□□□□□ -0.45
CPNE1-214ENST00000435747 NR2E1Q9Y466 385 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 KIAA1671Q9BY89 1806 aa12.23□□□□□ -0.45
CPNE1-214ENST00000435747 TTC3P53804 2025 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 PRDM1O75626 825 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 FGRP09769 529 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 SDHBP21912 280 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 CALML3P27482 149 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 SLC1A4P43007 532 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 NOVP48745 357 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 TDO2P48775 406 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 PPARAQ07869 468 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 NAALADL2Q58DX5 795 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 DTWD2Q8NBA8 298 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 NEDD1Q8NHV4 660 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 EXOC6Q8TAG9 804 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 SPPL3Q8TCT6 385 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 APBB2Q92870 758 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 SMOC2Q9H3U7 446 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 MTMR4Q9NYA4 1195 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 R4GN57 208 aa12.22□□□□□ -0.45
CPNE1-214ENST00000435747 CNOT1A5YKK6 2376 aaKnown RBP12.22□□□□□ -0.45
CPNE1-214ENST00000435747 FANCMQ8IYD8 2048 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 FLNBO75369 2602 aaKnown RBP12.21□□□□□ -0.45
CPNE1-214ENST00000435747 A0A0D9SFI3 127 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 FSD2A1L4K1 749 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 B4DLN1 442 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 NFIBO00712 420 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 ICAM1P05362 532 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 ITGB1P05556 798 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 SRGAP2BP0DMP2 458 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 AOC1P19801 751 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 EDNRBP24530 442 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 MRPL12P52815 198 aaKnown RBP12.21□□□□□ -0.45
CPNE1-214ENST00000435747 ARHGAP1Q07960 439 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 CWF19L1Q69YN2 538 aaKnown RBP12.21□□□□□ -0.45
CPNE1-214ENST00000435747 SLC30A10Q6XR72 485 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 SERINC5Q86VE9 423 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 POF1BQ8WVV4 589 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 LNPKQ9C0E8 428 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 RC3H2Q9HBD1 1191 aaKnown RBP12.21□□□□□ -0.45
CPNE1-214ENST00000435747 ANAPC4Q9UJX5 808 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
CPNE1-214ENST00000435747 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.46
CPNE1-214ENST00000435747 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms