RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ASLP04424 464 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 C8BP07358 591 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 GJA4P35212 333 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 AFF3P51826 1226 aaKnown RBP5.05□□□□□ -1.6
LINC01239-201ENST00000433645 ST5P78524 1137 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 FZD5Q13467 585 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 CRY1Q16526 586 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 CR1LQ2VPA4 569 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 C16orf86Q6ZW13 317 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 KCTD1Q719H9 257 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.05□□□□□ -1.6
LINC01239-201ENST00000433645 ZC3H7AQ8IWR0 971 aaKnown RBP5.05□□□□□ -1.6
LINC01239-201ENST00000433645 TTLL6Q8N841 843 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 LINC01356Q8N9X3 169 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 ARRDC4Q8NCT1 418 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 APPBP2Q92624 585 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 DDX11Q96FC9 970 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 SCLYQ96I15 445 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 YIPF4Q9BSR8 244 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 PCDHA9Q9Y5H5 950 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 PMF1-BGLAPU3KQ54 211 aa5.05□□□□□ -1.6
LINC01239-201ENST00000433645 ESYT3A0FGR9 886 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 ENPP3O14638 875 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 NKRFO15226 690 aaKnown RBP eCLIP5.04□□□□□ -1.6
LINC01239-201ENST00000433645 PLA2G1BP04054 148 aaKnown RBP5.04□□□□□ -1.6
LINC01239-201ENST00000433645 CKMP06732 381 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 MC3RP41968 323 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 FIGNQ5HY92 759 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 TEPPQ6URK8 271 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 CD300LDQ6UXZ3 194 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 BRAPQ7Z569 592 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 KYQ8NBH2 561 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 WRNIP1Q96S55 665 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 TMEM209Q96SK2 561 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 KCNJ15Q99712 375 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 C11orf84Q9BUA3 381 aaPredicted RBP5.04□□□□□ -1.6
LINC01239-201ENST00000433645 IRF2BPLQ9H1B7 796 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 BCAS3Q9H6U6 928 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 KANSL2Q9H9L4 492 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 CATSPERZQ9NTU4 200 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 SRPK3Q9UPE1 567 aa5.04□□□□□ -1.6
LINC01239-201ENST00000433645 ARID1BQ8NFD5 2236 aaPredicted RBP5.04□□□□□ -1.6
LINC01239-201ENST00000433645 TCRBV5S4A2TA0A5A2 114 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 CCDC66A2RUB6 948 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 SLC27A2O14975 620 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 CLASP2O75122 1294 aaKnown RBP5.03□□□□□ -1.6
LINC01239-201ENST00000433645 CYP7B1O75881 506 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 LRG1P02750 347 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 ZSCAN22P10073 491 aaPredicted RBP5.03□□□□□ -1.6
LINC01239-201ENST00000433645 COL6A2P12110 1019 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 FAHP16930 419 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 KCNA6P17658 529 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 IGFALSP35858 605 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 LIMS1P48059 325 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 TUSC3Q13454 348 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 VWA3BQ502W6 1294 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 HHIPL2Q6UWX4 724 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 ARHGAP36Q6ZRI8 547 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 SH3RF2Q8TEC5 729 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 CLEC4DQ8WXI8 215 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 CLUHP3Q96NS8 147 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 GORASP1Q9BQQ3 440 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 CBLCQ9ULV8 474 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 PLAAQ9Y263 795 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 TBX22Q9Y458 520 aa5.03□□□□□ -1.6
LINC01239-201ENST00000433645 TLDC2A0PJX2 215 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 RASGRP1O95267 797 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 RAPGEF3O95398 923 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 ASMTLO95671 621 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 CHGBP05060 677 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 PYGMP11217 842 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 PDE6AP16499 860 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 ITGA1P56199 1179 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 DLX2Q07687 328 aaPredicted RBP5.02□□□□□ -1.61
LINC01239-201ENST00000433645 ARHGAP44Q17R89 818 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 PAN2Q504Q3 1202 aaKnown RBP5.02□□□□□ -1.61
LINC01239-201ENST00000433645 PLEKHG4Q58EX7 1191 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 TTLL7Q6ZT98 887 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 OVCH1Q7RTY7 1134 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 FGD2Q7Z6J4 655 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 KIAA0907Q7Z7F0 614 aaPredicted RBP5.02□□□□□ -1.61
LINC01239-201ENST00000433645 JAZF1Q86VZ6 243 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 FEZ1Q99689 392 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 ORAI3Q9BRQ5 295 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 LUC7LQ9NQ29 371 aaKnown RBP5.02□□□□□ -1.61
LINC01239-201ENST00000433645 MAGEC2Q9UBF1 373 aaPredicted RBP5.02□□□□□ -1.61
LINC01239-201ENST00000433645 RAPGEFL1Q9UHV5 662 aa5.02□□□□□ -1.61
LINC01239-201ENST00000433645 MAN2B1O00754 1011 aa5.01□□□□□ -1.61
LINC01239-201ENST00000433645 FFAR3O14843 346 aa5.01□□□□□ -1.61
LINC01239-201ENST00000433645 PPP1R12AO14974 1030 aaPredicted RBP5.01□□□□□ -1.61
LINC01239-201ENST00000433645 SMARCA5O60264 1052 aaPredicted RBP5.01□□□□□ -1.61
LINC01239-201ENST00000433645 CDC45O75419 566 aa5.01□□□□□ -1.61
LINC01239-201ENST00000433645 AMY2AP04746 511 aa5.01□□□□□ -1.61
LINC01239-201ENST00000433645 SRGAP2CP0DJJ0 459 aa5.01□□□□□ -1.61
LINC01239-201ENST00000433645 AMY2BP19961 511 aa5.01□□□□□ -1.61
LINC01239-201ENST00000433645 POU3F2P20265 443 aaPredicted RBP5.01□□□□□ -1.61
LINC01239-201ENST00000433645 RPL13P26373 211 aaKnown RBP5.01□□□□□ -1.61
LINC01239-201ENST00000433645 THBS2P35442 1172 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms