RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 LRCH2Q5VUJ6 765 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 CYFIP1Q7L576 1253 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 TLK2Q86UE8 772 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
CNOT9-205ENST00000433439 DOCK5Q9H7D0 1870 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 CHMP2AO43633 222 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 GAS7O60861 476 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 OR52Z1P0C646 297 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 KCNA2P16389 499 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 ITGB3BPQ13352 177 aaPredicted RBP17.35■□□□□ 0.37
CNOT9-205ENST00000433439 NEDD9Q14511 834 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 ARMC5Q96C12 935 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 TEKT3Q9BXF9 490 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 AP5M1Q9H0R1 490 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 TCEAL9Q9UHQ7 104 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 CEP131Q9UPN4 1083 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 MYH15Q9Y2K3 1946 aa17.35■□□□□ 0.37
CNOT9-205ENST00000433439 NKRFO15226 690 aaKnown RBP eCLIP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 DUSP11O75319 330 aaKnown RBP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 PGK1P00558 417 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 ORC2Q13416 577 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 STK38Q15208 465 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 CELF3Q5SZQ8 465 aaKnown RBP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 GIMAP8Q8ND71 665 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 HAS1Q92839 578 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 SLC5A5Q92911 643 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 SPATA33Q96N06 139 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 KCNMB3Q9NPA1 279 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 XPNPEP3Q9NQH7 507 aa17.34■□□□□ 0.37
CNOT9-205ENST00000433439 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
CNOT9-205ENST00000433439 NOP56O00567 594 aaKnown RBP17.33■□□□□ 0.36
CNOT9-205ENST00000433439 MSCO60682 206 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.36
CNOT9-205ENST00000433439 C6orf222P0C671 652 aaPredicted RBP17.33■□□□□ 0.36
CNOT9-205ENST00000433439 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 SLFN12Q8IYM2 578 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 AFG1LQ8WV93 481 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 FAM20AQ96MK3 541 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 SENP7Q9BQF6 1050 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 SPC25Q9HBM1 224 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.36
CNOT9-205ENST00000433439 TBC1D22BQ9NU19 505 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 SLC9A2Q9UBY0 812 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 TELO2Q9Y4R8 837 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 PDE4DIPQ5VU43 2346 aa17.33■□□□□ 0.36
CNOT9-205ENST00000433439 NFASCO94856 1347 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 TBX3O15119 743 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 MARCKSP29966 332 aaPredicted RBP17.32■□□□□ 0.36
CNOT9-205ENST00000433439 BEX3Q00994 111 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 LAMC2Q13753 1193 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 METTL7BQ6UX53 244 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 RIT2Q99578 217 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 TTC12Q9H892 705 aaPredicted RBP17.32■□□□□ 0.36
CNOT9-205ENST00000433439 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 SAMM50Q9Y512 469 aa17.32■□□□□ 0.36
CNOT9-205ENST00000433439 MYADML2A6NDP7 307 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 DHX15O43143 795 aaKnown RBP17.31■□□□□ 0.36
CNOT9-205ENST00000433439 PSMD10O75832 226 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 BMP15O95972 392 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 TECP42680 631 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 KRT85P78386 507 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 ATP2C1P98194 919 aaPredicted RBP17.31■□□□□ 0.36
CNOT9-205ENST00000433439 PTPAQ15257 358 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 HSDL1Q3SXM5 330 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 TPRNQ4KMQ1 711 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
CNOT9-205ENST00000433439 NCAPH2Q6IBW4 605 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 UNC45AQ9H3U1 944 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 PAK6Q9NQU5 681 aaPredicted RBP17.31■□□□□ 0.36
CNOT9-205ENST00000433439 POLR3EQ9NVU0 708 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 CFAP45Q9UL16 551 aa17.31■□□□□ 0.36
CNOT9-205ENST00000433439 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 LAD1O00515 517 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 CCNE2O96020 404 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 TFRCP02786 760 aaKnown RBP17.3■□□□□ 0.36
CNOT9-205ENST00000433439 MYL3P08590 195 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 SOX10P56693 466 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 ACTR2P61160 394 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 FSCN1Q16658 493 aaKnown RBP17.3■□□□□ 0.36
CNOT9-205ENST00000433439 GNASQ5JWF2 1037 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 LHX8Q68G74 356 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 DTHD1Q6ZMT9 781 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 MIER3Q7Z3K6 550 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 TNPO1Q92973 898 aaKnown RBP17.3■□□□□ 0.36
CNOT9-205ENST00000433439 Q9Y3F1 56 aa17.3■□□□□ 0.36
CNOT9-205ENST00000433439 ELP1O95163 1332 aa17.29■□□□□ 0.36
CNOT9-205ENST00000433439 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
CNOT9-205ENST00000433439 POTEMA6NI47 508 aa17.29■□□□□ 0.36
CNOT9-205ENST00000433439 SPTLC2O15270 562 aa17.29■□□□□ 0.36
CNOT9-205ENST00000433439 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-205ENST00000433439 CPT1AP50416 773 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms