RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TRAF5O00463 557 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 TTI1O43156 1089 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 ORC4O43929 436 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 DIAPH2O60879 1101 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 DRD4P21917 467 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 TXKP42681 527 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 RTN2O75298 545 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 UPP2O95045 317 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 MMEP08473 750 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 CHN1P15882 459 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 EPS15P42566 896 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 ASTE1Q2TB18 679 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 ARMC2Q8NEN0 867 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 CCSER1Q9C0I3 900 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 TLR2O60603 784 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 CAND2O75155 1236 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 DDAH1O94760 285 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 SERPING1P05155 500 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 MYL1P05976 194 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 ECHS1P30084 290 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 CUL1Q13616 776 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 LMBR1Q8WVP7 490 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 SAMD15Q9P1V8 674 aa12.65□□□□□ -0.38
HMGCS1-202ENST00000433297 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.39
HMGCS1-202ENST00000433297 EME2A4GXA9 379 aaPredicted RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 PPIP5K2O43314 1243 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 PDE8AO60658 829 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 LACTB2Q53H82 288 aaPredicted RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 MAEAQ7L5Y9 396 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 PRCCQ92733 491 aaPredicted RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 CALML4Q96GE6 196 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 SPAG5Q96R06 1193 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 FAM167BQ9BTA0 163 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 PCDHA6Q9UN73 950 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 PCDHA8Q9Y5H6 950 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 SSU72P8A0A1W2PR75 194 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 DNAJC8O75937 253 aaPredicted RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 MAGEC3Q8TD91 643 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 AGAP11Q8TF27 550 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.64□□□□□ -0.393e-18■■■□□ 16.7
HMGCS1-202ENST00000433297 FGFR1OPO95684 399 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 FGFR2P21802 821 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 SLCO1A2P46721 670 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 CENPPQ6IPU0 288 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 DAAM2Q86T65 1068 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 NELFCDQ8IXH7 590 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 KIF2BQ8N4N8 673 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 TRIM51Q9BSJ1 452 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 YIPF3Q9GZM5 350 aa12.64□□□□□ -0.39
HMGCS1-202ENST00000433297 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 CYP2D6P10635 497 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 KIF5BP33176 963 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 COPB2P35606 906 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 GYG1P46976 350 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 KCNJ2P63252 427 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 IRX1P78414 480 aaPredicted RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 C1orf131Q8NDD1 294 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 PRMT1Q99873 361 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 VAT1LQ9HCJ6 419 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 MROH5Q6ZUA9 1318 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 DISP2A7MBM2 1401 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 KIF4AO95239 1232 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 SLC18A3Q16572 532 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 RNF217Q8TC41 542 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 MGARPQ8TDB4 240 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 TSG101Q99816 390 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 UTP11Q9Y3A2 253 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 A0A0G2JS52 829 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 MYMKA6NI61 221 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms