RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 MXRA8Q9BRK3 442 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 VPS16Q9H269 839 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 PANK4Q9NVE7 773 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 TAB2Q9NYJ8 693 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 PNMA2Q9UL42 364 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 DNM3Q9UQ16 869 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
SF1-209ENST00000433274 PHIPQ8WWQ0 1821 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 ITGB5P18084 799 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 CYP11B2P19099 503 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 SLC12A3P55017 1021 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 EEF2KMTQ96G04 330 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 TAAR1Q96RJ0 339 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 DUSP9Q99956 384 aaKnown RBP16.89■□□□□ 0.29
SF1-209ENST00000433274 RNF146Q9NTX7 359 aa16.89■□□□□ 0.29
SF1-209ENST00000433274 N4BP3O15049 544 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 PPP1R12BO60237 982 aaPredicted RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 EIF2AK2P19525 551 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 COPB1P53618 953 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 EHHADHQ08426 723 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 TBX2Q13207 712 aaPredicted RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 RNF207Q6ZRF8 634 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 CATSPERGQ6ZRH7 1159 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 POLR3CQ9BUI4 534 aaPredicted RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 THAP9Q9H5L6 903 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 PKD2L1Q9P0L9 805 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 LRRC10BA6NIK2 292 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 IPO5O00410 1097 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 KRT18P05783 430 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 PPP2R5CQ13362 524 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 CTTNQ14247 550 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 LRRC41Q15345 812 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 ARSHQ5FYA8 562 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 REPS2Q8NFH8 660 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 WDR11Q9BZH6 1224 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 MAP3K20Q9NYL2 800 aaKnown RBP16.88■□□□□ 0.29
SF1-209ENST00000433274 CSADQ9Y600 493 aa16.88■□□□□ 0.29
SF1-209ENST00000433274 NRDCO43847 1150 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 PSMD2Q13200 908 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 PURBQ96QR8 312 aaKnown RBP16.87■□□□□ 0.29
SF1-209ENST00000433274 TEKT3Q9BXF9 490 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 SEMA6BQ9H3T3 888 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 TBC1D7Q9P0N9 293 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 PARP14Q460N5 1801 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 DDX39AO00148 427 aaKnown RBP16.87■□□□□ 0.29
SF1-209ENST00000433274 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 PCNX4Q63HM2 1172 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
SF1-209ENST00000433274 SYT2Q8N9I0 419 aaPredicted RBP16.87■□□□□ 0.29
SF1-209ENST00000433274 RMDN3Q96TC7 470 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 HSD17B14Q9BPX1 270 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 UNC45AQ9H3U1 944 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 KCNH7Q9NS40 1196 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 MAGEC2Q9UBF1 373 aaPredicted RBP16.87■□□□□ 0.29
SF1-209ENST00000433274 ZNF214Q9UL59 606 aaPredicted RBP16.87■□□□□ 0.29
SF1-209ENST00000433274 ADAMTS5Q9UNA0 930 aa16.87■□□□□ 0.29
SF1-209ENST00000433274 MRPS9P82933 396 aaKnown RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 BAATQ14032 418 aaPredicted RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 TMEM132BQ14DG7 1078 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 PGM5Q15124 567 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 CENPPQ6IPU0 288 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 SAMD3Q8N6K7 520 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 NOC3LQ8WTT2 800 aaKnown RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 BHMT2Q9H2M3 363 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 EEF1GP26641 437 aaKnown RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 EPHX2P34913 555 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 PBX1P40424 430 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 OAZ1P54368 228 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 ADKP55263 362 aaKnown RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 PLS1Q14651 629 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 TKFCQ3LXA3 575 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 HERC4Q5GLZ8 1057 aaPredicted RBP16.86■□□□□ 0.29
SF1-209ENST00000433274 SH3D19Q5HYK7 790 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 PIGOQ8TEQ8 1089 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 TUFT1Q9NNX1 390 aa16.86■□□□□ 0.29
SF1-209ENST00000433274 RLFQ13129 1914 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 SPDYE16A6NNV3 312 aaPredicted RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 SLITRK3O94933 977 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 BCRP11274 1271 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 ARHGEF16Q5VV41 709 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 L3MBTL3Q96JM7 780 aaPredicted RBP16.85■□□□□ 0.29
SF1-209ENST00000433274 RIT2Q99578 217 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 FGFBP2Q9BYJ0 223 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 HOXC10Q9NYD6 342 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 UBIAD1Q9Y5Z9 338 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 FRMPD4Q14CM0 1322 aa16.85■□□□□ 0.29
SF1-209ENST00000433274 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms