RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 USP17L20D6RJB6 530 aa18■□□□□ 0.47
PMS1-212ENST00000432292 FSBPO95073 299 aa18■□□□□ 0.47
PMS1-212ENST00000432292 CYP27A1Q02318 531 aa18■□□□□ 0.47
PMS1-212ENST00000432292 CKAP4Q07065 602 aaKnown RBP18■□□□□ 0.47
PMS1-212ENST00000432292 USP17L24Q0WX57 530 aa18■□□□□ 0.47
PMS1-212ENST00000432292 IKQ13123 557 aaPredicted RBP18■□□□□ 0.47
PMS1-212ENST00000432292 PAK1Q13153 545 aa18■□□□□ 0.47
PMS1-212ENST00000432292 NNTQ13423 1086 aa18■□□□□ 0.47
PMS1-212ENST00000432292 CERKLQ49MI3 558 aaPredicted RBP18■□□□□ 0.47
PMS1-212ENST00000432292 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
PMS1-212ENST00000432292 NAA35Q5VZE5 725 aa18■□□□□ 0.47
PMS1-212ENST00000432292 CCDC70Q6NSX1 233 aa18■□□□□ 0.47
PMS1-212ENST00000432292 USP17L6PQ6QN14 398 aa18■□□□□ 0.47
PMS1-212ENST00000432292 CCDC13Q8IYE1 715 aa18■□□□□ 0.47
PMS1-212ENST00000432292 CCDC51Q96ER9 411 aa18■□□□□ 0.47
PMS1-212ENST00000432292 TARSL2A2RTX5 802 aaKnown RBP18■□□□□ 0.47
PMS1-212ENST00000432292 OPA1O60313 960 aa18■□□□□ 0.47
PMS1-212ENST00000432292 HSF2BPO75031 334 aa18■□□□□ 0.47
PMS1-212ENST00000432292 HERVK_113P62684 666 aa18■□□□□ 0.47
PMS1-212ENST00000432292 HDLBPQ00341 1268 aaKnown RBP18■□□□□ 0.47
PMS1-212ENST00000432292 AENQ8WTP8 325 aaKnown RBP18■□□□□ 0.47
PMS1-212ENST00000432292 CCDC114Q96M63 670 aa18■□□□□ 0.47
PMS1-212ENST00000432292 IGKV6D-41A0A0C4DH26 115 aa18■□□□□ 0.47
PMS1-212ENST00000432292 PSMD14O00487 310 aa18■□□□□ 0.47
PMS1-212ENST00000432292 SCAF8Q9UPN6 1271 aaKnown RBP18■□□□□ 0.47
PMS1-212ENST00000432292 CLRN2A0PK11 232 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 RCCD1A6NED2 376 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 BACH1O14867 736 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 RAD17O75943 681 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 CDKAL1Q5VV42 579 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 SPICE1Q8N0Z3 855 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 PRMT6Q96LA8 375 aaPredicted RBP17.99■□□□□ 0.47
PMS1-212ENST00000432292 ZDHHC15Q96MV8 337 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 SLC40A1Q9NP59 571 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 TTC26A0AVF1 554 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
PMS1-212ENST00000432292 MARCH6O60337 910 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 LSP1P33241 339 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 SLC1A4P43007 532 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 NT5C2P49902 561 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 SF3A3Q12874 501 aaKnown RBP eCLIP17.99■□□□□ 0.472e-6■■■■□ 23.8
PMS1-212ENST00000432292 NAA25Q14CX7 972 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 PREPLQ4J6C6 727 aaPredicted RBP17.99■□□□□ 0.47
PMS1-212ENST00000432292 ZNF658Q5TYW1 1059 aaPredicted RBP17.99■□□□□ 0.47
PMS1-212ENST00000432292 SWAP70Q9UH65 585 aa17.99■□□□□ 0.47
PMS1-212ENST00000432292 HPDP32754 393 aaPredicted RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 DNA2P51530 1060 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 COPB1P53618 953 aaKnown RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 NAP1L1P55209 391 aaKnown RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 ASIC1P78348 528 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 CALCRLQ16602 461 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 STRIP1Q5VSL9 837 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 PPANQ9NQ55 473 aaKnown RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 EDIL3O43854 480 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 ERCC3P19447 782 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 NOVP48745 357 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 TSR1Q2NL82 804 aaKnown RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 DYMQ7RTS9 669 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 ZNF473Q8WTR7 871 aaKnown RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 FAXDC2Q96IV6 333 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 TCP10L2B9ZVM9 353 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 E7EVH7 732 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 JAG1P78504 1218 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 BIRC2Q13490 618 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 ZIM3Q96PE6 472 aa17.98■□□□□ 0.47
PMS1-212ENST00000432292 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
PMS1-212ENST00000432292 SCN9AQ15858 1988 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 FCER1AP12319 257 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 MMTAG2Q9BU76 263 aaKnown RBP17.97■□□□□ 0.47
PMS1-212ENST00000432292 CCSER1Q9C0I3 900 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 LRWD1Q9UFC0 647 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 ESYT3A0FGR9 886 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 SNHG28P0DPA3 235 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 USH1GQ495M9 461 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 SLFN13Q68D06 897 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 MICALCLQ6ZW33 695 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
PMS1-212ENST00000432292 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
PMS1-212ENST00000432292 PDE4DQ08499 809 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 PAPD7Q5XG87 772 aaKnown RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 YDJCA8MPS7 323 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 KLRC4O43908 158 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 GCFC2P16383 781 aaKnown RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 IFT81Q8WYA0 676 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 CCDC43Q96MW1 224 aaKnown RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 CCT8L2Q96SF2 557 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 PYM1Q9BRP8 204 aaKnown RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 RMND1Q9NWS8 449 aa17.96■□□□□ 0.47
PMS1-212ENST00000432292 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 LUC7L2Q9Y383 392 aaKnown RBP17.96■□□□□ 0.47
PMS1-212ENST00000432292 SRCAPQ6ZRS2 3230 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms