RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 NUGGCQ68CJ6 796 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 CENPKQ9BS16 269 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 YY1AP1Q9H869 796 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 SPC25Q9HBM1 224 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-206ENST00000431893 CARMIL3Q8ND23 1372 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 MYCP01106 439 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-206ENST00000431893 KCNA1Q09470 495 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 CASP8Q14790 479 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 ANKRD36BP1Q96IX9 119 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 IWS1Q96ST2 819 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 ZNF577Q9BSK1 485 aa12.35□□□□□ -0.43
SEC16A-206ENST00000431893 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-206ENST00000431893 SRGAP2BP0DMP2 458 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 PDE6AP16499 860 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 POLR2BP30876 1174 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 PMS1P54277 932 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 MTRQ99707 1265 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 RASGRF2O14827 1237 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 ZBTB24O43167 697 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 LARP4BQ92615 738 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 MCF2P10911 925 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 ZNF18P17022 549 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 RANBP1P43487 201 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 DYNLL1P63167 89 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 APBA1Q02410 837 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 OR6B2Q6IFH4 312 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 P2RX5Q93086 422 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 EAF2Q96CJ1 260 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 PHLPP2Q6ZVD8 1323 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 HADHAP40939 763 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 UBE2SQ16763 222 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 RPS6KC1Q96S38 1066 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 CLRN2A0PK11 232 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 PPP1R36Q96LQ0 422 aa12.34□□□□□ -0.43
SEC16A-206ENST00000431893 WARS2Q9UGM6 360 aaKnown RBP12.34□□□□□ -0.43
SEC16A-206ENST00000431893 A0A087WUV0 522 aaPredicted RBP12.33□□□□□ -0.43
SEC16A-206ENST00000431893 SFI1A8K8P3 1242 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 KRT14P02533 472 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 HLA-DPA1P20036 260 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 ICA1Q05084 483 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.43
SEC16A-206ENST00000431893 RNF207Q6ZRF8 634 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 UNC5CLQ8IV45 518 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 CCDC90BQ9GZT6 254 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 KMT5AQ9NQR1 393 aa12.33□□□□□ -0.43
SEC16A-206ENST00000431893 SKIP12755 728 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 CAPRIN1Q14444 709 aaKnown RBP12.33□□□□□ -0.44
SEC16A-206ENST00000431893 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 ZNF589Q86UQ0 364 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-206ENST00000431893 MAP7D3Q8IWC1 876 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 SNX25Q9H3E2 840 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 MRPL11Q9Y3B7 192 aaKnown RBP12.33□□□□□ -0.44
SEC16A-206ENST00000431893 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 COA7Q96BR5 231 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 RUNDC3BQ96NL0 473 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 DENND4BO75064 1496 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-206ENST00000431893 NR5A1Q13285 461 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 EPC1Q9H2F5 836 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 PIK3C2GO75747 1445 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 SPAG7O75391 227 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 MDH1BQ5I0G3 518 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 DNAJC24Q6P3W2 148 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
SEC16A-206ENST00000431893 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.44
SEC16A-206ENST00000431893 PCDHA1Q9Y5I3 950 aa12.33□□□□□ -0.44
SEC16A-206ENST00000431893 GDF11O95390 407 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 HSPA4LO95757 839 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 FLOT2Q14254 428 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 PASD1Q8IV76 773 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 EFHD1Q9BUP0 239 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 EIF2AK4Q9P2K8 1649 aaKnown RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 MMEP08473 750 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 CA4P22748 312 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 UBE3AQ05086 875 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 HEMGNQ9BXL5 484 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 INO80BQ9C086 356 aaPredicted RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 ZCWPW1Q9H0M4 648 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 MARK3P27448 753 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms