RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CASQ1P31415 396 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 CIITAP33076 1130 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 SREBF1P36956 1147 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 FXR1P51114 621 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX56-204ENST00000431640 TOGARAM2Q6ZUX3 1019 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 DDX12PQ92771 950 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 TSG101Q99816 390 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 PRR12Q9ULL5 1215 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 LUC7L2Q9Y383 392 aaKnown RBP14.28□□□□□ -0.12
DDX56-204ENST00000431640 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 PASKQ96RG2 1323 aa14.28□□□□□ -0.12
DDX56-204ENST00000431640 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.12
DDX56-204ENST00000431640 KRT9P35527 623 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 MTIF2P46199 727 aaKnown RBP14.27□□□□□ -0.12
DDX56-204ENST00000431640 FKBP15Q5T1M5 1219 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 DYMQ7RTS9 669 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 FAM160B2Q86V87 743 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 CCDC65Q8IXS2 484 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 ZNF784Q8NCA9 323 aaPredicted RBP14.27□□□□□ -0.12
DDX56-204ENST00000431640 KIAA0895Q8NCT3 520 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 OR8K1Q8NGG5 319 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 TSC1Q92574 1164 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 SLC39A2Q9NP94 309 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.12
DDX56-204ENST00000431640 CAPN11Q9UMQ6 739 aa14.27□□□□□ -0.12
DDX56-204ENST00000431640 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 IDEP14735 1019 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 GJA5P36382 358 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 GNG11P61952 73 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 EHHADHQ08426 723 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 NCBP1Q09161 790 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 TBC1D8BQ0IIM8 1120 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 PDCL2Q8N4E4 241 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 CNOT6LQ96LI5 555 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 SEMA6BQ9H3T3 888 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 EHMT1Q9H9B1 1298 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 ZNF215Q9UL58 517 aaPredicted RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 CELF2O95319 508 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 YY1P25490 414 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 ZNF76P36508 570 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 TUBB2AQ13885 445 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 USH1GQ495M9 461 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 FIGNQ5HY92 759 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 LDLRAD1Q5T700 205 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 RAD9BQ6WBX8 426 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 TUBB2BQ9BVA1 445 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 ELP3Q9H9T3 547 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 PANK4Q9NVE7 773 aa14.26□□□□□ -0.13
DDX56-204ENST00000431640 ZNHIT6Q9NWK9 470 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 MRPL11Q9Y3B7 192 aaKnown RBP14.26□□□□□ -0.13
DDX56-204ENST00000431640 RLFQ13129 1914 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 KIF5CO60282 957 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 PLA2G4BP0C869 781 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 NF2P35240 595 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 MTMR2Q13614 643 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 ECM1Q16610 540 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 PRR16Q569H4 304 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 KCNK18Q7Z418 384 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 ETNPPLQ8TBG4 499 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 ERGIC2Q96RQ1 377 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 DNAJC7Q99615 494 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 VCPKMTQ9H867 229 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 GINM1Q9NU53 330 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 MYO1AQ9UBC5 1043 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 FEM1BQ9UK73 627 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
DDX56-204ENST00000431640 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
DDX56-204ENST00000431640 TTC26A0AVF1 554 aa14.24□□□□□ -0.13
DDX56-204ENST00000431640 GCOM1H8Y6P7 765 aaPredicted RBP14.24□□□□□ -0.13
DDX56-204ENST00000431640 URI1O94763 535 aaPredicted RBP14.24□□□□□ -0.13
DDX56-204ENST00000431640 POLR2MP0CAP2 368 aa14.24□□□□□ -0.13
DDX56-204ENST00000431640 RPA1P27694 616 aa14.24□□□□□ -0.13
DDX56-204ENST00000431640 IREB2P48200 963 aaKnown RBP14.24□□□□□ -0.13
DDX56-204ENST00000431640 TTLL12Q14166 644 aaPredicted RBP14.24□□□□□ -0.13
DDX56-204ENST00000431640 RANBP17Q9H2T7 1088 aaKnown RBP14.24□□□□□ -0.13
DDX56-204ENST00000431640 GBA2Q9HCG7 927 aaPredicted RBP14.24□□□□□ -0.13
DDX56-204ENST00000431640 AFG3L2Q9Y4W6 797 aa14.24□□□□□ -0.13
DDX56-204ENST00000431640 B4DLN1 442 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 GNA14O95837 355 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDX56-204ENST00000431640 SNAP25P60880 206 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 ZBED6P86452 979 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 FKBP3Q00688 224 aaKnown RBP14.23□□□□□ -0.13
DDX56-204ENST00000431640 COASYQ13057 564 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 SPP2Q13103 211 aa14.23□□□□□ -0.13
DDX56-204ENST00000431640 MTF1Q14872 753 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms