RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SUGT1Q9Y2Z0 365 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 EMC9Q9Y3B6 208 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 X6R8D5 127 aa3.34□□□□□ -1.87
CDC40-204ENST00000431461 ANKRD34BA5PLL1 514 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 SSBP05455 408 aaKnown RBP eCLIP3.33□□□□□ -1.88
CDC40-204ENST00000431461 GIPRP48546 466 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 GTF2A2P52657 109 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 RACK1P63244 317 aaKnown RBP3.33□□□□□ -1.88
CDC40-204ENST00000431461 USP39Q53GS9 565 aaKnown RBP3.33□□□□□ -1.88
CDC40-204ENST00000431461 CEP68Q76N32 757 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 KLHL36Q8N4N3 616 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 CRACR2BQ8N4Y2 399 aaPredicted RBP3.33□□□□□ -1.88
CDC40-204ENST00000431461 BVESQ8NE79 360 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 CPLX3Q8WVH0 158 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 UBXN4Q92575 508 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 DRC1Q96MC2 740 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 CLIC6Q96NY7 704 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 TINF2Q9BSI4 451 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 YIPF4Q9BSR8 244 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 MEGF9Q9H1U4 602 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 CYP26B1Q9NR63 512 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 ZNF652Q9Y2D9 606 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 R3HCC1Q9Y3T6 440 aaKnown RBP3.33□□□□□ -1.88
CDC40-204ENST00000431461 PCDHGB7Q9Y5F8 929 aa3.33□□□□□ -1.88
CDC40-204ENST00000431461 TIMM13Q9Y5L4 95 aaPredicted RBP3.33□□□□□ -1.88
CDC40-204ENST00000431461 HGSO14964 777 aaPredicted RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 NARSO43776 548 aaKnown RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 TADA3O75528 432 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 NAT2P11245 290 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 ATF4P18848 351 aaPredicted RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 ATP2B1P20020 1258 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 FBLP22087 321 aaKnown RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 CASP7P55210 303 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 EIF6P56537 245 aaKnown RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 RPL11P62913 178 aaKnown RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 NFATC3Q12968 1075 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 PHF19Q5T6S3 580 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 POMZP3Q6PJE2 187 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 BHLHA9Q7RTU4 235 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 FRS2Q8WU20 508 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 ZCCHC14Q8WYQ9 949 aaKnown RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 TOE1Q96GM8 510 aaKnown RBP3.32□□□□□ -1.88
CDC40-204ENST00000431461 LRRC37BQ96QE4 947 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 WRNIP1Q96S55 665 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 TMEM209Q96SK2 561 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 APBA2Q99767 749 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.32□□□□□ -1.88
CDC40-204ENST00000431461 TANGO6Q9C0B7 1094 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 ACBD3Q9H3P7 528 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 SEC61A2Q9H9S3 476 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 GINM1Q9NU53 330 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 DTLQ9NZJ0 730 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 HSPBP1Q9NZL4 362 aa3.32□□□□□ -1.88
CDC40-204ENST00000431461 ARNTLO00327 626 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 NOP56O00567 594 aaKnown RBP3.31□□□□□ -1.88
CDC40-204ENST00000431461 FOXS1O43638 330 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 STK10O94804 968 aaKnown RBP3.31□□□□□ -1.88
CDC40-204ENST00000431461 KCNH1O95259 989 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 LRG1P02750 347 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 CYP4F3Q08477 520 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 CHRNA2Q15822 529 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 LSM12Q3MHD2 195 aaKnown RBP3.31□□□□□ -1.88
CDC40-204ENST00000431461 E4F1Q66K89 784 aaPredicted RBP3.31□□□□□ -1.88
CDC40-204ENST00000431461 KIAA1211LQ6NV74 962 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 TEPPQ6URK8 271 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 CCDC81Q6ZN84 652 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 CKAP2LQ8IYA6 745 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 NPLOC4Q8TAT6 608 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 EDAQ92838 391 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 EXTL1Q92935 676 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 TRMT2BQ96GJ1 504 aaKnown RBP3.31□□□□□ -1.88
CDC40-204ENST00000431461 BARX1Q9HBU1 254 aaPredicted RBP3.31□□□□□ -1.88
CDC40-204ENST00000431461 APEX2Q9UBZ4 518 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 FTSJ1Q9UET6 329 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 ADAM29Q9UKF5 820 aa3.31□□□□□ -1.88
CDC40-204ENST00000431461 TCRBV5S2A0A599 114 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 H7BY64 318 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 U2SURPO15042 1029 aaKnown RBP3.3□□□□□ -1.88
CDC40-204ENST00000431461 FGRP09769 529 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 FPR2P25090 351 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 DNAJA1P31689 397 aaKnown RBP3.3□□□□□ -1.88
CDC40-204ENST00000431461 BCL6P41182 706 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 ZNF143P52747 638 aaPredicted RBP3.3□□□□□ -1.88
CDC40-204ENST00000431461 PTH1RQ03431 593 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 TESK1Q15569 626 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 EMC4Q5J8M3 183 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 GTF2IRD2BQ6EKJ0 949 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 TCTN3Q6NUS6 607 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 TRMT10BQ6PF06 316 aaKnown RBP3.3□□□□□ -1.88
CDC40-204ENST00000431461 VHLLQ6RSH7 139 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 GPR155Q7Z3F1 870 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 GTF2IRD2Q86UP8 949 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 NLRP10Q86W26 655 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 TRIM59Q8IWR1 403 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 ARRDC4Q8NCT1 418 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 GIMAP8Q8ND71 665 aaPredicted RBP3.3□□□□□ -1.88
CDC40-204ENST00000431461 TMEM169Q96HH4 297 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 MRGPRX3Q96LB0 322 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 NKX2-4Q9H2Z4 354 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms